RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 LINC01556Q5JQF7 62 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 TMEM243Q9BU79 118 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 CSDC2Q9Y534 153 aaKnown RBP6.27□□□□□ -1.41
CHFR-220ENST00000541817 IGLV5-45A0A087WSX0 123 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 TRBV6-4A0A1B0GX49 114 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 PRSS2P07478 247 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 IFITM1P13164 125 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 Q1RN00 199 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 COPS9Q8WXC6 57 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 LINC01600Q96MT4 127 aa6.26□□□□□ -1.41
CHFR-220ENST00000541817 PANO1I0J062 215 aa6.25□□□□□ -1.41
CHFR-220ENST00000541817 MIAQ16674 131 aa6.25□□□□□ -1.41
CHFR-220ENST00000541817 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
CHFR-220ENST00000541817 NDUFA1O15239 70 aa6.24□□□□□ -1.41
CHFR-220ENST00000541817 CDKN2A-AS1Q9UH64 79 aa6.24□□□□□ -1.41
CHFR-220ENST00000541817 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
CHFR-220ENST00000541817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
CHFR-220ENST00000541817 A0A1B0GV72 72 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 TCL1BO95988 128 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 SFTA2Q6UW10 78 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 MTURNQ8N3F0 131 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
CHFR-220ENST00000541817 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 H7C2G1 150 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 COX6CP09669 75 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 COX6A2Q02221 97 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 SH2D6Q7Z4S9 175 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 LITAFQ99732 161 aa6.22□□□□□ -1.41
CHFR-220ENST00000541817 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
CHFR-220ENST00000541817 HERV-K104P63124 156 aa6.21□□□□□ -1.42
CHFR-220ENST00000541817 TRBV30A0A0K0K1B3 111 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 GAGE6Q13070 117 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
CHFR-220ENST00000541817 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 M0QXV9 152 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 NPC2P61916 151 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 FOXI1Q12951 378 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
CHFR-220ENST00000541817 IGKV2D-24A0A075B6R9 120 aa6.18□□□□□ -1.42
CHFR-220ENST00000541817 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
CHFR-220ENST00000541817 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
CHFR-220ENST00000541817 C9JAW5 83 aa6.18□□□□□ -1.42
CHFR-220ENST00000541817 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
CHFR-220ENST00000541817 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
CHFR-220ENST00000541817 SLC25A20O43772 301 aa6.17□□□□□ -1.42
CHFR-220ENST00000541817 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
CHFR-220ENST00000541817 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
CHFR-220ENST00000541817 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
CHFR-220ENST00000541817 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
CHFR-220ENST00000541817 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
CHFR-220ENST00000541817 TRIAP1O43715 76 aa6.16□□□□□ -1.42
CHFR-220ENST00000541817 ZNF625Q96I27 306 aaPredicted RBP6.16□□□□□ -1.42
CHFR-220ENST00000541817 TRBV10-2A0A0K0K1G8 114 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 SS18Q15532 418 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 ANKRD29Q8N6D5 301 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 DAND5Q8N907 189 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
CHFR-220ENST00000541817 TMEM262E9PQX1 116 aa6.14□□□□□ -1.43
CHFR-220ENST00000541817 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
CHFR-220ENST00000541817 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
CHFR-220ENST00000541817 IGLV4-60A0A075B6I1 120 aa6.13□□□□□ -1.43
CHFR-220ENST00000541817 A0A1B0GUV1 79 aa6.13□□□□□ -1.43
CHFR-220ENST00000541817 H3BT86 120 aa6.13□□□□□ -1.43
CHFR-220ENST00000541817 C2orf82Q6UX34 121 aa6.13□□□□□ -1.43
CHFR-220ENST00000541817 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
CHFR-220ENST00000541817 A0A087WZ39 114 aa6.12□□□□□ -1.43
CHFR-220ENST00000541817 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
CHFR-220ENST00000541817 LINC00959A0A1B0GUT2 108 aa6.12□□□□□ -1.43
CHFR-220ENST00000541817 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
CHFR-220ENST00000541817 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
CHFR-220ENST00000541817 A0A087WYN8 130 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 LST1O00453 97 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 COX7A2LO14548 114 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 LINC00158P58513 81 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 UBE2WQ96B02 151 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 RMI2Q96E14 147 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
CHFR-220ENST00000541817 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
CHFR-220ENST00000541817 CRPP02741 224 aa6.1□□□□□ -1.43
CHFR-220ENST00000541817 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
CHFR-220ENST00000541817 SOSTDC1Q6X4U4 206 aa6.1□□□□□ -1.43
CHFR-220ENST00000541817 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms