RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 ALMS1Q8TCU4 4167 aa-0.03□□□□□ -2.41
C12orf56-204ENST00000541802 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
C12orf56-204ENST00000541802 RAPGEF2Q9Y4G8 1499 aa-0.03□□□□□ -2.41
C12orf56-204ENST00000541802 VPS8Q8N3P4 1428 aa-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 KNDC1Q76NI1 1749 aa-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 CPSF4LA6NMK7 179 aaKnown RBP-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 ETDBQ3ZM63 59 aa-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 ZNF720Q7Z2F6 126 aa-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 APLNQ9ULZ1 77 aa-0.04□□□□□ -2.42
C12orf56-204ENST00000541802 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 LRP2P98164 4655 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 KIAA0556O60303 1618 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 TEP1Q99973 2627 aaKnown RBP-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 APC2O95996 2303 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 HYDINQ4G0P3 5121 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 F8WEM9 126 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 SPRR2DP22532 72 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 HMGN3Q15651 99 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 CREBBPQ92793 2442 aa-0.05□□□□□ -2.42
C12orf56-204ENST00000541802 EPPK1P58107 5090 aaKnown RBP-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 EP300Q09472 2414 aaPredicted RBP-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 LOC730098B7Z3J9 87 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 D6R8Y8 96 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 LEPROTL1O95214 131 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 ALKAL2Q6UX46 152 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 MUSTN1Q8IVN3 82 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 EDC4Q6P2E9 1401 aaKnown RBP-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 PAPPA2Q9BXP8 1791 aa-0.06□□□□□ -2.42
C12orf56-204ENST00000541802 MARF1Q9Y4F3 1742 aaKnown RBP-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 SLIT1O75093 1534 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 ABCC2Q92887 1545 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 HECTD1Q9ULT8 2610 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 CCDC141Q6ZP82 1450 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 I3L3M4 83 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 HIGD1BQ9P298 99 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 FASNP49327 2511 aaKnown RBP-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 FMN2Q9NZ56 1722 aa-0.07□□□□□ -2.42
C12orf56-204ENST00000541802 TENM2Q9NT68 2774 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 ACANP16112 2415 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 GYPAP02724 150 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 IGLC2P0DOY2 106 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 IGLC3P0DOY3 106 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 C20orf78Q9BR46 151 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 BPTFQ12830 3046 aa-0.08□□□□□ -2.42
C12orf56-204ENST00000541802 TARBP1Q13395 1621 aaKnown RBP-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 NKTRP30414 1462 aaKnown RBP-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 COL6A5A8TX70 2615 aa-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 USH2AO75445 5202 aa-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 ANKRD36A6QL64 1941 aa-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 CCNB3Q8WWL7 1395 aa-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
C12orf56-204ENST00000541802 SHPRHQ149N8 1683 aa-0.1□□□□□ -2.43
C12orf56-204ENST00000541802 H1FX-AS1Q4G0G2 97 aa-0.1□□□□□ -2.43
C12orf56-204ENST00000541802 DOPEY1Q5JWR5 2465 aa-0.1□□□□□ -2.43
C12orf56-204ENST00000541802 SAMD9Q5K651 1589 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 SPTY2D1-AS1A0A0U1RR47 76 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 SMIM11AP58511 58 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 DEFB112Q30KQ8 113 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 MRPL34Q9BQ48 92 aaKnown RBP-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 Q9H521 79 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 ATP10BO94823 1461 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
C12orf56-204ENST00000541802 EPRSP07814 1512 aaKnown RBP-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 MON2Q7Z3U7 1717 aa-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 HMGN2P05204 90 aaKnown RBP-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 PEA15Q15121 130 aa-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 UBE2D4Q9Y2X8 147 aa-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 CLTCQ00610 1675 aaKnown RBP-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 SETD2Q9BYW2 2564 aaPredicted RBP-0.12□□□□□ -2.43
C12orf56-204ENST00000541802 CUX1P39880 1505 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 LRRC37AA6NMS7 1700 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 ANKRD26Q9UPS8 1709 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 MAP1AP78559 2803 aaPredicted RBP-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 AKAP12Q02952 1782 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 C5P01031 1676 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 FANCAO15360 1455 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 M0R2T5 61 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 PYY3Q5JQD4 70 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 MYH4Q9Y623 1939 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 REV3LO60673 3130 aa-0.13□□□□□ -2.43
C12orf56-204ENST00000541802 COL12A1Q99715 3063 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 IQSEC2Q5JU85 1478 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 FAT3Q8TDW7 4589 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 CCL22O00626 93 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 NMSQ5H8A3 153 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 HEPN1Q6WQI6 88 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 V9GYS6 101 aa-0.14□□□□□ -2.43
C12orf56-204ENST00000541802 USP9XQ93008 2570 aaPredicted RBP-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 SPRR2BP35325 72 aa-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 PLGLAQ15195 96 aa-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 LELP1Q5T871 98 aa-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 NEXMIFQ5QGS0 1516 aa-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 TROQ12816 1431 aaPredicted RBP-0.15□□□□□ -2.43
C12orf56-204ENST00000541802 CRYBG1Q9Y4K1 1723 aa-0.16□□□□□ -2.43
C12orf56-204ENST00000541802 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.43
C12orf56-204ENST00000541802 A0A1B0GUT8 65 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms