RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 PHIPQ8WWQ0 1821 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 GVQW2A0A096LPI5 108 aaPredicted RBP0.23□□□□□ -2.37
CUL3-214ENST00000541548 NPFFO15130 113 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 SNCGO76070 127 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 NMBP08949 121 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 SPRR2EP22531 72 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 SPRR2BP35325 72 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 SPRR2AP35326 72 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 MT4P47944 62 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 Q96NJ1 140 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 CACNA1CQ13936 2221 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 NRXN2Q9P2S2 1712 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 GCC2Q8IWJ2 1684 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 PKD1P98161 4303 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 TRGV1A0A0A0MS02 117 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 MCRIP1C9JLW8 97 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 PITX3O75364 302 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 SMR3BP02814 79 aaPredicted RBP0.22□□□□□ -2.37
CUL3-214ENST00000541548 APODP05090 189 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 SPRR2DP22532 72 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 COX6A2Q02221 97 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 SMCO1Q147U7 214 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 DEFB121Q5J5C9 76 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 Q5VSD8 79 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 SMIM11BQ8TCY0 68 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 USF3Q68DE3 2245 aa0.22□□□□□ -2.37
CUL3-214ENST00000541548 SIPA1L3O60292 1781 aaPredicted RBP0.22□□□□□ -2.37
CUL3-214ENST00000541548 ANKARQ7Z5J8 1434 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 CCNB3Q8WWL7 1395 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 IBTKQ9P2D0 1353 aaPredicted RBP0.21□□□□□ -2.38
CUL3-214ENST00000541548 DNAH5Q8TE73 4624 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 TSPAN19P0C672 248 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 COPZ1P61923 177 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 HAMPP81172 84 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 C9orf116Q5BN46 136 aaPredicted RBP0.21□□□□□ -2.38
CUL3-214ENST00000541548 SPTSSAQ969W0 71 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 LYSTQ99698 3801 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 PAIP2BQ9ULR5 123 aaKnown RBP0.21□□□□□ -2.38
CUL3-214ENST00000541548 PLXNB2O15031 1838 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 APOBP04114 4563 aaKnown RBP0.21□□□□□ -2.38
CUL3-214ENST00000541548 DNAH10Q8IVF4 4471 aa0.21□□□□□ -2.38
CUL3-214ENST00000541548 HUWE1Q7Z6Z7 4374 aaKnown RBP0.2□□□□□ -2.38
CUL3-214ENST00000541548 LPAP08519 4548 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 PATJQ8NI35 1801 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 PIPP12273 146 aaPredicted RBP0.2□□□□□ -2.38
CUL3-214ENST00000541548 GCHFRP30047 84 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 EDDM3BP56851 147 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 RPS25P62851 125 aaKnown RBP0.2□□□□□ -2.38
CUL3-214ENST00000541548 DEFB109BQ30KR1 87 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 KCNRGQ8N5I3 272 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 PFDN5Q99471 154 aa0.2□□□□□ -2.38
CUL3-214ENST00000541548 FAM92AA1XBS5 289 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 NCR2O95944 276 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 SPINK1P00995 79 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 MT1HL1P0DM35 61 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 Q6ZRX8 168 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 VPS8Q8N3P4 1428 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 A0A1B0GUL6 1792 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 ARFGEF2Q9Y6D5 1785 aa0.19□□□□□ -2.38
CUL3-214ENST00000541548 VPS13DQ5THJ4 4388 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 DNAH6Q9C0G6 4158 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 MYH9P35579 1960 aaKnown RBP0.18□□□□□ -2.38
CUL3-214ENST00000541548 VPS13BQ7Z7G8 4022 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 UBE2D1P51668 147 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 MT1HP80294 61 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 S100A12P80511 92 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 FAM213BQ8TBF2 198 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 SEC11CQ9BY50 192 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 PPLO60437 1756 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 LAMB1P07942 1786 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 DNAH3Q8TD57 4116 aa0.18□□□□□ -2.38
CUL3-214ENST00000541548 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
CUL3-214ENST00000541548 MUC17Q685J3 4493 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 TRAV1-2A0A0B4J238 106 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 TMEM14DPA8MWL7 114 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 LYNX1G3V0Z9 82 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 IFNA17P01571 189 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 STATHP02808 62 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 Q5BKY6 102 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 SCIMPQ6UWF3 145 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 C1orf54Q8WWF1 131 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 TCEAL4Q96EI5 215 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 FAM107BQ9H098 131 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 DNAH2Q9P225 4427 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 PARP14Q460N5 1801 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 DOCK2Q92608 1830 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 TNXBP22105 4242 aa0.17□□□□□ -2.38
CUL3-214ENST00000541548 ZNF236Q9UL36 1845 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 NDUFB6O95139 128 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 HIST1H1DP16402 221 aaKnown RBP0.16□□□□□ -2.38
CUL3-214ENST00000541548 CBLN1P23435 193 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 TFF3Q07654 80 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 PDCD10Q9BUL8 212 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 TMEM191AQ9H0A3 160 aa0.16□□□□□ -2.38
CUL3-214ENST00000541548 U3KQA8 63 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms