RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 A4D1N5 150 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 A6NJY4 79 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 PFN2P35080 140 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 LINC00158P58513 81 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
ATL3-204ENST00000540699 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
ATL3-204ENST00000540699 Q6ZRU5 148 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
ATL3-204ENST00000540699 NHP2Q9NX24 153 aaKnown RBP6.87□□□□□ -1.31
ATL3-204ENST00000540699 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 K7ERJ3 54 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 CFC1P0CG37 223 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATL3-204ENST00000540699 NPC2P61916 151 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
ATL3-204ENST00000540699 HERC1Q15751 4861 aa6.85□□□□□ -1.31
ATL3-204ENST00000540699 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
ATL3-204ENST00000540699 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
ATL3-204ENST00000540699 SLPIP03973 132 aa6.85□□□□□ -1.31
ATL3-204ENST00000540699 COPS9Q8WXC6 57 aa6.85□□□□□ -1.31
ATL3-204ENST00000540699 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.84□□□□□ -1.31
ATL3-204ENST00000540699 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
ATL3-204ENST00000540699 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
ATL3-204ENST00000540699 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
ATL3-204ENST00000540699 SYCNQ0VAF6 134 aa6.84□□□□□ -1.31
ATL3-204ENST00000540699 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
ATL3-204ENST00000540699 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
ATL3-204ENST00000540699 Q8N1X5 172 aa6.83□□□□□ -1.32
ATL3-204ENST00000540699 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
ATL3-204ENST00000540699 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
ATL3-204ENST00000540699 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
ATL3-204ENST00000540699 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
ATL3-204ENST00000540699 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
ATL3-204ENST00000540699 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
ATL3-204ENST00000540699 UBR4Q5T4S7 5183 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 A0A1B0GV90 55 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 Q6ZSA8 131 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 Q8NDZ9 215 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
ATL3-204ENST00000540699 NDUFC2O95298 119 aa6.79□□□□□ -1.32
ATL3-204ENST00000540699 TSPAN13O95857 204 aa6.79□□□□□ -1.32
ATL3-204ENST00000540699 Q6ZRP5 223 aa6.79□□□□□ -1.32
ATL3-204ENST00000540699 LINC01620Q4KN68 170 aa6.78□□□□□ -1.32
ATL3-204ENST00000540699 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
ATL3-204ENST00000540699 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
ATL3-204ENST00000540699 H3BUT2 72 aa6.77□□□□□ -1.33
ATL3-204ENST00000540699 XGP55808 180 aa6.77□□□□□ -1.33
ATL3-204ENST00000540699 SDIM1Q6ZPB5 146 aa6.77□□□□□ -1.33
ATL3-204ENST00000540699 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
ATL3-204ENST00000540699 NAA38Q9BRA0 125 aaKnown RBP6.77□□□□□ -1.33
ATL3-204ENST00000540699 FAM30AQ9NZY2 134 aa6.77□□□□□ -1.33
ATL3-204ENST00000540699 FAT1Q14517 4588 aa6.76□□□□□ -1.33
ATL3-204ENST00000540699 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
ATL3-204ENST00000540699 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
ATL3-204ENST00000540699 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
ATL3-204ENST00000540699 TRAV13-2A0A0B4J235 113 aa6.75□□□□□ -1.33
ATL3-204ENST00000540699 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
ATL3-204ENST00000540699 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
ATL3-204ENST00000540699 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
ATL3-204ENST00000540699 VPREB1P12018 145 aa6.74□□□□□ -1.33
ATL3-204ENST00000540699 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
ATL3-204ENST00000540699 GAGE2EQ4V326 116 aa6.74□□□□□ -1.33
ATL3-204ENST00000540699 GAGE2DQ9UEU5 116 aa6.74□□□□□ -1.33
ATL3-204ENST00000540699 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
ATL3-204ENST00000540699 PRR3P79522 188 aaKnown RBP6.73□□□□□ -1.33
ATL3-204ENST00000540699 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
ATL3-204ENST00000540699 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
ATL3-204ENST00000540699 H7C2G1 150 aa6.72□□□□□ -1.33
ATL3-204ENST00000540699 NCR3O14931 201 aa6.72□□□□□ -1.33
ATL3-204ENST00000540699 FABP2P12104 132 aa6.72□□□□□ -1.33
ATL3-204ENST00000540699 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
ATL3-204ENST00000540699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
ATL3-204ENST00000540699 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 PANO1I0J062 215 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 TRIAP1O43715 76 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 GAGE2BQ13066 116 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 Q1RN00 199 aa6.71□□□□□ -1.34
ATL3-204ENST00000540699 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
ATL3-204ENST00000540699 A0A096LNI7 61 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 K7EP34 96 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 IGLV6-57P01721 117 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
ATL3-204ENST00000540699 VAMP3Q15836 100 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 SPACA4Q8TDM5 124 aa6.7□□□□□ -1.34
ATL3-204ENST00000540699 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
ATL3-204ENST00000540699 OR13C6PQ8NH95 151 aa6.69□□□□□ -1.34
ATL3-204ENST00000540699 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
ATL3-204ENST00000540699 SMIM11BQ8TCY0 68 aa6.69□□□□□ -1.34
ATL3-204ENST00000540699 TMEM126AQ9H061 195 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms