RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TRIAP1O43715 76 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 HERVK_113P63121 156 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 HERV-K104P63124 156 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 IGLV5-45A0A087WSX0 123 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 A0A096LPF7 62 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 TRBV7-7A0A0K0K1E9 115 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 OXTP01178 125 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 TRACP01848 142 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 FUSP35637 526 aaKnown RBP eCLIP4.03□□□□□ -1.76
CPSF7-219ENST00000539952 CXCL5P42830 114 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 LITAFQ99732 161 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
CPSF7-219ENST00000539952 CSDC2Q9Y534 153 aaKnown RBP4.03□□□□□ -1.76
CPSF7-219ENST00000539952 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 TRAV4A0A0B4J268 109 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 B5MCH6 92 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 H7C2G1 150 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 COX7A2LO14548 114 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 IGHV3-53P01767 116 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
CPSF7-219ENST00000539952 LINC00643Q86TS7 51 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 UBE2D4Q9Y2X8 147 aa4.02□□□□□ -1.77
CPSF7-219ENST00000539952 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 TRBV10-1A0A0K0K1A3 114 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 RS1O15537 224 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 OPRPNQ99935 248 aaPredicted RBP4.01□□□□□ -1.77
CPSF7-219ENST00000539952 CHCHD7Q9BUK0 85 aa4.01□□□□□ -1.77
CPSF7-219ENST00000539952 MYCBP2O75592 4640 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 IGLV5-39A0A0G2JS06 123 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 H0YGX0 51 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 PSCAO43653 123 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 DAZ4Q86SG3 579 aaKnown RBP4□□□□□ -1.77
CPSF7-219ENST00000539952 DAND5Q8N907 189 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 DAZ3Q9NR90 486 aaKnown RBP4□□□□□ -1.77
CPSF7-219ENST00000539952 PRO0255Q9UI72 69 aa4□□□□□ -1.77
CPSF7-219ENST00000539952 IGHV3-64A0A075B6Q5 118 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 TRAV8-3A0A0A6YYJ7 113 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
CPSF7-219ENST00000539952 RPL36AP83881 106 aaKnown RBP3.99□□□□□ -1.77
CPSF7-219ENST00000539952 ADAMTSL4-AS1Q5T5F5 129 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 Q6ZTI0 123 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
CPSF7-219ENST00000539952 C1orf43Q9BWL3 253 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
CPSF7-219ENST00000539952 LRCOL1A6NCL2 159 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 UQCRQO14949 82 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 BAALC-AS2P0C853 105 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
CPSF7-219ENST00000539952 HAMPP81172 84 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 SDIM1Q6ZPB5 146 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 FAM30AQ9NZY2 134 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 CDKN2A-AS1Q9UH64 79 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 SS18L2Q9UHA2 77 aa3.98□□□□□ -1.77
CPSF7-219ENST00000539952 CCDC179H3BU77 68 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 MALP21145 153 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 C3orf22Q8N5N4 141 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 Q8N814 137 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
CPSF7-219ENST00000539952 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-219ENST00000539952 TRGV1A0A0A0MS02 117 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 A0A1B0GX51 115 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-219ENST00000539952 IBA57-AS1B1ANH7 110 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 ATOX1O00244 68 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 UBE2L6O14933 153 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 DNAL4O96015 105 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 FHL2Q14192 279 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 LINC00242Q5T6M2 205 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 C5orf38Q86SI9 138 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 C11orf72Q8NBR9 251 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 LINC00526Q96FQ7 95 aa3.96□□□□□ -1.78
CPSF7-219ENST00000539952 IGHV3-73A0A0B4J1V6 119 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 IGHV3-38A0A0C4DH36 116 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 K7EQD1 137 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 CRPP02741 224 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
CPSF7-219ENST00000539952 Q6ZSA8 131 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 WFDC10BQ8IUB3 73 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 ZNF625Q96I27 306 aaPredicted RBP3.95□□□□□ -1.78
CPSF7-219ENST00000539952 CDC42SE2Q9NRR3 84 aa3.95□□□□□ -1.78
CPSF7-219ENST00000539952 TRGV4A0A0C4DH28 118 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 SMIM1B2RUZ4 78 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 H3BQ85 93 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 COX7CP15954 63 aa3.94□□□□□ -1.78
CPSF7-219ENST00000539952 NPC2P61916 151 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms