RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 C22orf24Q9Y442 160 aa4.54□□□□□ -1.68
LSAMP-207ENST00000539563 HCG22E2RYF7 251 aa4.54□□□□□ -1.68
LSAMP-207ENST00000539563 CELSR3Q9NYQ7 3312 aa4.54□□□□□ -1.68
LSAMP-207ENST00000539563 SMCR5Q8TEV8 140 aa4.53□□□□□ -1.68
LSAMP-207ENST00000539563 A0A087WSZ3 146 aa4.53□□□□□ -1.68
LSAMP-207ENST00000539563 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
LSAMP-207ENST00000539563 A0A1B0GW54 56 aa4.53□□□□□ -1.68
LSAMP-207ENST00000539563 C1orf195Q5TG92 126 aa4.52□□□□□ -1.69
LSAMP-207ENST00000539563 LAMA5O15230 3695 aa4.52□□□□□ -1.69
LSAMP-207ENST00000539563 RELNP78509 3460 aa4.52□□□□□ -1.69
LSAMP-207ENST00000539563 LINC00337Q8N6G1 96 aa4.52□□□□□ -1.69
LSAMP-207ENST00000539563 IGHV3OR16-9A0A0B4J2B5 98 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 LOC400499M0QZD8 3231 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 LRRK2Q5S007 2527 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 BCE1O60756 84 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 LINC00846Q9NV44 126 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 A0A087WVE0 104 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 PRLHP81277 87 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 FRYQ5TBA9 3013 aa4.51□□□□□ -1.69
LSAMP-207ENST00000539563 SBSPONQ8IVN8 264 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 IGLV5-45A0A087WSX0 123 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 A8MTW9 85 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 PIEZO2Q9H5I5 2752 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 LINC00315P59091 139 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
LSAMP-207ENST00000539563 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
LSAMP-207ENST00000539563 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
LSAMP-207ENST00000539563 TMEM254Q8TBM7 123 aa4.49□□□□□ -1.69
LSAMP-207ENST00000539563 MDFIQ99750 246 aa4.49□□□□□ -1.69
LSAMP-207ENST00000539563 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
LSAMP-207ENST00000539563 RETNLBQ9BQ08 111 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 LINC00167Q96N53 147 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 X6R8D5 127 aa4.48□□□□□ -1.69
LSAMP-207ENST00000539563 FREM2Q5SZK8 3169 aa4.47□□□□□ -1.69
LSAMP-207ENST00000539563 ACYP2P14621 99 aa4.47□□□□□ -1.69
LSAMP-207ENST00000539563 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
LSAMP-207ENST00000539563 CACNA1AO00555 2505 aa4.47□□□□□ -1.69
LSAMP-207ENST00000539563 MOBPQ13875 183 aa4.46□□□□□ -1.7
LSAMP-207ENST00000539563 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
LSAMP-207ENST00000539563 NAV2Q8IVL1 2488 aa4.46□□□□□ -1.7
LSAMP-207ENST00000539563 H3BPC8 53 aa4.46□□□□□ -1.7
LSAMP-207ENST00000539563 DMXL1Q9Y485 3027 aa4.46□□□□□ -1.7
LSAMP-207ENST00000539563 C16orf90A8MZG2 172 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 CRYGAP11844 174 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 C2CD3Q4AC94 2353 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 KLK9Q2XQG4 91 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 LOC110117498A0A087WWA1 95 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 CDIP1Q9H305 208 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 PSPHP1O15172 72 aa4.45□□□□□ -1.7
LSAMP-207ENST00000539563 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
LSAMP-207ENST00000539563 LINC00313P59037 77 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 FAM229AH3BQW9 127 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 IGKV2D-30A0A075B6S6 120 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 SPINK1P00995 79 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 Q8NAQ8 132 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 Q6ZQT0 140 aa4.44□□□□□ -1.7
LSAMP-207ENST00000539563 Q6ZRP5 223 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 NOTCH2Q04721 2471 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 CCDC168Q8NDH2 2452 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 Q6ZRX8 168 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 Q8NBF4 154 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 LINC00476Q8WZB0 136 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 ZZEF1O43149 2961 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 PHF5AQ7RTV0 110 aaKnown RBP4.43□□□□□ -1.7
LSAMP-207ENST00000539563 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 A0A1B0GU69 56 aa4.43□□□□□ -1.7
LSAMP-207ENST00000539563 RTL8CO15255 209 aa4.42□□□□□ -1.7
LSAMP-207ENST00000539563 DNAH10OSP0CZ25 163 aa4.42□□□□□ -1.7
LSAMP-207ENST00000539563 TYMSOSQ8TAI1 123 aa4.42□□□□□ -1.7
LSAMP-207ENST00000539563 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
LSAMP-207ENST00000539563 FN1P02751 2386 aaKnown RBP4.42□□□□□ -1.7
LSAMP-207ENST00000539563 A0A0C4DFX4 3053 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 ANKRD17O75179 2603 aaKnown RBP4.41□□□□□ -1.7
LSAMP-207ENST00000539563 ZFYVE26Q68DK2 2539 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 SMCPP49901 116 aaPredicted RBP4.41□□□□□ -1.7
LSAMP-207ENST00000539563 IGF2RP11717 2491 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 KRTAP24-1Q3LI83 254 aa4.41□□□□□ -1.7
LSAMP-207ENST00000539563 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.7
LSAMP-207ENST00000539563 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
LSAMP-207ENST00000539563 TRBV7-4A0A0J9YYF1 115 aa4.39□□□□□ -1.71
LSAMP-207ENST00000539563 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
LSAMP-207ENST00000539563 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
LSAMP-207ENST00000539563 PRO0461Q9UI25 63 aa4.39□□□□□ -1.71
LSAMP-207ENST00000539563 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
LSAMP-207ENST00000539563 Q9UF83 564 aa4.38□□□□□ -1.71
LSAMP-207ENST00000539563 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
LSAMP-207ENST00000539563 SPAG11AQ6PDA7 123 aa4.38□□□□□ -1.71
LSAMP-207ENST00000539563 MYO18BQ8IUG5 2567 aa4.38□□□□□ -1.71
LSAMP-207ENST00000539563 TLN1Q9Y490 2541 aaKnown RBP4.38□□□□□ -1.71
LSAMP-207ENST00000539563 VPREB1P12018 145 aa4.37□□□□□ -1.71
LSAMP-207ENST00000539563 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms