RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 LINC00158P58513 81 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 SYCNQ0VAF6 134 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 SRSF9Q13242 221 aaKnown RBP eCLIP5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 BATFQ16520 125 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 CEND1Q8N111 149 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 SPANXCQ9NY87 97 aa5.96□□□□□ -1.46
RTN4IP1-204ENST00000539449 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 TMEM238C9JI98 176 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 FUSP35637 526 aaKnown RBP eCLIP5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 TAL2Q16559 108 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 C1orf134Q5TEV5 83 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
RTN4IP1-204ENST00000539449 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.94□□□□□ -1.46
RTN4IP1-204ENST00000539449 A0A087WTM6 91 aa5.94□□□□□ -1.46
RTN4IP1-204ENST00000539449 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
RTN4IP1-204ENST00000539449 TRBV30A0A0K0K1B3 111 aa5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 M0R143 59 aa5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 CIRBPQ14011 172 aaKnown RBP5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 SFTA2Q6UW10 78 aa5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 Q8NDZ9 215 aa5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 CARD19Q96LW7 228 aa5.93□□□□□ -1.46
RTN4IP1-204ENST00000539449 A4D1N5 150 aa5.92□□□□□ -1.46
RTN4IP1-204ENST00000539449 F8WDY8 70 aa5.92□□□□□ -1.46
RTN4IP1-204ENST00000539449 SND1-IT1Q9HBX3 110 aa5.92□□□□□ -1.46
RTN4IP1-204ENST00000539449 K7ERJ3 54 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 PTTG1IPP53801 180 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 COX17Q14061 63 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 LINC01620Q4KN68 170 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 Q6ZVH6 145 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 Q8N814 137 aa5.91□□□□□ -1.46
RTN4IP1-204ENST00000539449 CFC1BP0CG36 223 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 CFC1P0CG37 223 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 IFITM1P13164 125 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 C14orf177Q52M58 125 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 Q6ZRP5 223 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 NHP2Q9NX24 153 aaKnown RBP5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
RTN4IP1-204ENST00000539449 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
RTN4IP1-204ENST00000539449 C16orf90A8MZG2 172 aa5.89□□□□□ -1.47
RTN4IP1-204ENST00000539449 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
RTN4IP1-204ENST00000539449 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
RTN4IP1-204ENST00000539449 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
RTN4IP1-204ENST00000539449 IGKV2-28A0A075B6P5 120 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 A0A1B0GWB2 263 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 NDUFC2-KCTD14E9PQ53 114 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 IGKV2D-28P01615 120 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 RAB37Q96AX2 223 aa5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
RTN4IP1-204ENST00000539449 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 A0A096LNI7 61 aa5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 RPL24P83731 157 aaKnown RBP5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 RPL18AQ02543 176 aaKnown RBP5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 FAT1Q14517 4588 aa5.87□□□□□ -1.47
RTN4IP1-204ENST00000539449 VPS13BQ7Z7G8 4022 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 FAM168BA1KXE4 195 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 CHTF8P0CG12 524 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 PPDPFQ9H3Y8 114 aa5.86□□□□□ -1.47
RTN4IP1-204ENST00000539449 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 TMEM238LA0A1B0GVL6 79 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 A6NDN8 102 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 PANO1I0J062 215 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 NCR3O14931 201 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
RTN4IP1-204ENST00000539449 A0A0B4J2C4 111 aa5.84□□□□□ -1.47
RTN4IP1-204ENST00000539449 VPREB1P12018 145 aa5.84□□□□□ -1.47
RTN4IP1-204ENST00000539449 IGKV2-24A0A0C4DH68 120 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 A0A1W2PNN7 141 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 H7C2G1 150 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 NDUFC2O95298 119 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 TSPAN13O95857 204 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 RPL13AP40429 203 aaKnown RBP5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 PRO1854Q9UHT4 67 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 RNF213Q63HN8 5207 aa5.83□□□□□ -1.48
RTN4IP1-204ENST00000539449 IGLV5-52A0A0A0MRZ9 124 aa5.82□□□□□ -1.48
RTN4IP1-204ENST00000539449 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
RTN4IP1-204ENST00000539449 KRTAP4-12Q9BQ66 201 aa5.82□□□□□ -1.48
RTN4IP1-204ENST00000539449 A0A1B0GV90 55 aa5.81□□□□□ -1.48
RTN4IP1-204ENST00000539449 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
RTN4IP1-204ENST00000539449 H3BUT2 72 aa5.81□□□□□ -1.48
RTN4IP1-204ENST00000539449 PLA2G2DQ9UNK4 145 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms