RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 EPPK1P58107 5090 aaKnown RBP11.16□□□□□ -0.62
CLN6-202ENST00000538696 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
CLN6-202ENST00000538696 CFC1P0CG37 223 aa11.15□□□□□ -0.62
CLN6-202ENST00000538696 SYCNQ0VAF6 134 aa11.15□□□□□ -0.62
CLN6-202ENST00000538696 COX17Q14061 63 aa11.15□□□□□ -0.62
CLN6-202ENST00000538696 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
CLN6-202ENST00000538696 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
CLN6-202ENST00000538696 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
CLN6-202ENST00000538696 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.13□□□□□ -0.63
CLN6-202ENST00000538696 A0A1B0GV90 55 aa11.13□□□□□ -0.63
CLN6-202ENST00000538696 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
CLN6-202ENST00000538696 A0A0B4J2C4 111 aa11.12□□□□□ -0.63
CLN6-202ENST00000538696 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
CLN6-202ENST00000538696 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
CLN6-202ENST00000538696 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
CLN6-202ENST00000538696 PKHD1P08F94 4074 aa11.1□□□□□ -0.63
CLN6-202ENST00000538696 C9orf118A6NHY6 69 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
CLN6-202ENST00000538696 C16orf90A8MZG2 172 aa11.08□□□□□ -0.64
CLN6-202ENST00000538696 H3BUT2 72 aa11.08□□□□□ -0.64
CLN6-202ENST00000538696 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
CLN6-202ENST00000538696 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
CLN6-202ENST00000538696 TSPAN13O95857 204 aa11.07□□□□□ -0.64
CLN6-202ENST00000538696 DNAH8Q96JB1 4490 aa11.07□□□□□ -0.64
CLN6-202ENST00000538696 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
CLN6-202ENST00000538696 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
CLN6-202ENST00000538696 KRTAP10-1P60331 282 aa11.06□□□□□ -0.64
CLN6-202ENST00000538696 Q8NDZ9 215 aa11.06□□□□□ -0.64
CLN6-202ENST00000538696 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
CLN6-202ENST00000538696 H7C2G1 150 aa11.05□□□□□ -0.64
CLN6-202ENST00000538696 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
CLN6-202ENST00000538696 TLX1NBP0CAT3 122 aa11.04□□□□□ -0.64
CLN6-202ENST00000538696 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
CLN6-202ENST00000538696 Q6ZRP5 223 aa11.04□□□□□ -0.64
CLN6-202ENST00000538696 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
CLN6-202ENST00000538696 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
CLN6-202ENST00000538696 SDIM1Q6ZPB5 146 aa11.03□□□□□ -0.64
CLN6-202ENST00000538696 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
CLN6-202ENST00000538696 A0A1W2PPM0 123 aa11.01□□□□□ -0.65
CLN6-202ENST00000538696 NDUFC2O95298 119 aa11.01□□□□□ -0.65
CLN6-202ENST00000538696 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
CLN6-202ENST00000538696 Q1RN00 199 aa11.01□□□□□ -0.65
CLN6-202ENST00000538696 BIRC6Q9NR09 4857 aa11□□□□□ -0.65
CLN6-202ENST00000538696 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
CLN6-202ENST00000538696 NCR3O14931 201 aa11□□□□□ -0.65
CLN6-202ENST00000538696 C9orf129Q5T035 196 aaKnown RBP11□□□□□ -0.65
CLN6-202ENST00000538696 A0A096LNI7 61 aa10.99□□□□□ -0.65
CLN6-202ENST00000538696 TRAV13-2A0A0B4J235 113 aa10.99□□□□□ -0.65
CLN6-202ENST00000538696 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
CLN6-202ENST00000538696 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
CLN6-202ENST00000538696 VAMP3Q15836 100 aa10.98□□□□□ -0.65
CLN6-202ENST00000538696 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
CLN6-202ENST00000538696 APOBP04114 4563 aaKnown RBP10.97□□□□□ -0.65
CLN6-202ENST00000538696 PANO1I0J062 215 aa10.97□□□□□ -0.65
CLN6-202ENST00000538696 VPREB1P12018 145 aa10.97□□□□□ -0.65
CLN6-202ENST00000538696 Q6ZSA8 131 aa10.97□□□□□ -0.65
CLN6-202ENST00000538696 FAM30AQ9NZY2 134 aa10.97□□□□□ -0.65
CLN6-202ENST00000538696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.97□□□□□ -0.65
CLN6-202ENST00000538696 FABP2P12104 132 aa10.96□□□□□ -0.65
CLN6-202ENST00000538696 IGKV2-24A0A0C4DH68 120 aa10.95□□□□□ -0.66
CLN6-202ENST00000538696 PSMB2P49721 201 aa10.95□□□□□ -0.66
CLN6-202ENST00000538696 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
CLN6-202ENST00000538696 TRIAP1O43715 76 aa10.94□□□□□ -0.66
CLN6-202ENST00000538696 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
CLN6-202ENST00000538696 SPCS1Q9Y6A9 102 aa10.94□□□□□ -0.66
CLN6-202ENST00000538696 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
CLN6-202ENST00000538696 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
CLN6-202ENST00000538696 K7EP34 96 aa10.92□□□□□ -0.66
CLN6-202ENST00000538696 RYR1P21817 5038 aa10.92□□□□□ -0.66
CLN6-202ENST00000538696 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
CLN6-202ENST00000538696 HAMPP81172 84 aa10.91□□□□□ -0.66
CLN6-202ENST00000538696 SMIM11BQ8TCY0 68 aa10.91□□□□□ -0.66
CLN6-202ENST00000538696 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.66
CLN6-202ENST00000538696 PLA2G2DQ9UNK4 145 aa10.9□□□□□ -0.66
CLN6-202ENST00000538696 RPL28P46779 137 aaKnown RBP10.89□□□□□ -0.67
CLN6-202ENST00000538696 S100A7L2Q5SY68 101 aa10.89□□□□□ -0.67
CLN6-202ENST00000538696 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
CLN6-202ENST00000538696 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
CLN6-202ENST00000538696 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
CLN6-202ENST00000538696 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
CLN6-202ENST00000538696 M0R378 163 aa10.88□□□□□ -0.67
CLN6-202ENST00000538696 SCXQ7RTU7 201 aa10.88□□□□□ -0.67
CLN6-202ENST00000538696 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
CLN6-202ENST00000538696 KIAA1109Q2LD37 5005 aa10.88□□□□□ -0.67
CLN6-202ENST00000538696 IGLV5-37A0A075B6J1 123 aa10.87□□□□□ -0.67
CLN6-202ENST00000538696 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
CLN6-202ENST00000538696 TCL1BO95988 128 aa10.87□□□□□ -0.67
CLN6-202ENST00000538696 IGLV6-57P01721 117 aa10.87□□□□□ -0.67
CLN6-202ENST00000538696 XGP55808 180 aa10.87□□□□□ -0.67
CLN6-202ENST00000538696 A0A087WYN8 130 aa10.86□□□□□ -0.67
CLN6-202ENST00000538696 UBE2V1Q13404 147 aa10.86□□□□□ -0.67
CLN6-202ENST00000538696 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
CLN6-202ENST00000538696 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
CLN6-202ENST00000538696 NKAPP1Q8N9T2 125 aa10.86□□□□□ -0.67
CLN6-202ENST00000538696 CIRBP-AS1Q8TBR5 109 aa10.86□□□□□ -0.67
CLN6-202ENST00000538696 A0A1W2PNN7 141 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms