RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 IGKV2-28A0A075B6P5 120 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 IGKV2D-28P01615 120 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 ACYP1P07311 99 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 A0A087WZ39 114 aa7.35□□□□□ -1.23
CLIP1-210ENST00000538120 GAGE2AQ6NT46 116 aa7.34□□□□□ -1.23
CLIP1-210ENST00000538120 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
CLIP1-210ENST00000538120 COX7B2Q8TF08 81 aa7.34□□□□□ -1.23
CLIP1-210ENST00000538120 A0A087WYN8 130 aa7.34□□□□□ -1.24
CLIP1-210ENST00000538120 LINC00643Q86TS7 51 aa7.34□□□□□ -1.24
CLIP1-210ENST00000538120 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
CLIP1-210ENST00000538120 SDIM1Q6ZPB5 146 aa7.33□□□□□ -1.24
CLIP1-210ENST00000538120 COPS9Q8WXC6 57 aa7.33□□□□□ -1.24
CLIP1-210ENST00000538120 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
CLIP1-210ENST00000538120 MAST4O15021 2626 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
CLIP1-210ENST00000538120 XCL1P47992 114 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 LELP1Q5T871 98 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 LINC00269Q8N2A0 174 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 IMUPQ9GZP8 106 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 CRPP02741 224 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 SS18Q15532 418 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
CLIP1-210ENST00000538120 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
CLIP1-210ENST00000538120 TRAV13-2A0A0B4J235 113 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 LINC00158P58513 81 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 Q6ZTC4 211 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 PFN2P35080 140 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 CCL18P55774 89 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 LYPD5Q6UWN5 251 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 C14orf132Q9NPU4 83 aa7.3□□□□□ -1.24
CLIP1-210ENST00000538120 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
CLIP1-210ENST00000538120 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
CLIP1-210ENST00000538120 REG3AQ06141 175 aa7.29□□□□□ -1.24
CLIP1-210ENST00000538120 COL6A5A8TX70 2615 aa7.29□□□□□ -1.24
CLIP1-210ENST00000538120 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-210ENST00000538120 SLPIP03973 132 aa7.28□□□□□ -1.24
CLIP1-210ENST00000538120 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
CLIP1-210ENST00000538120 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
CLIP1-210ENST00000538120 C3orf22Q8N5N4 141 aa7.28□□□□□ -1.24
CLIP1-210ENST00000538120 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-210ENST00000538120 KLK5Q9Y337 293 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-210ENST00000538120 H3BNG1 76 aa7.28□□□□□ -1.24
CLIP1-210ENST00000538120 KPRPQ5T749 579 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-210ENST00000538120 UQCRQO14949 82 aa7.27□□□□□ -1.24
CLIP1-210ENST00000538120 DNAL4O96015 105 aa7.27□□□□□ -1.24
CLIP1-210ENST00000538120 PMAIP1Q13794 54 aa7.27□□□□□ -1.24
CLIP1-210ENST00000538120 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.24
CLIP1-210ENST00000538120 DPH3Q96FX2 82 aa7.27□□□□□ -1.24
CLIP1-210ENST00000538120 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.25
CLIP1-210ENST00000538120 LECT2O14960 151 aa7.27□□□□□ -1.25
CLIP1-210ENST00000538120 NDUFC2O95298 119 aa7.27□□□□□ -1.25
CLIP1-210ENST00000538120 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
CLIP1-210ENST00000538120 TENM3Q9P273 2699 aa7.27□□□□□ -1.25
CLIP1-210ENST00000538120 IGKV3D-7A0A0C4DH55 119 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 NCR3O14931 201 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 TMEM258P61165 79 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 Q8IZM0 81 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
CLIP1-210ENST00000538120 HUWE1Q7Z6Z7 4374 aaKnown RBP7.25□□□□□ -1.25
CLIP1-210ENST00000538120 K7EIL1 84 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 IBA57-AS1B1ANH7 110 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 CXCL5P42830 114 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
CLIP1-210ENST00000538120 A0A087WVE0 104 aa7.24□□□□□ -1.25
CLIP1-210ENST00000538120 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
CLIP1-210ENST00000538120 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
CLIP1-210ENST00000538120 WFDC10BQ8IUB3 73 aa7.24□□□□□ -1.25
CLIP1-210ENST00000538120 HIST1H4AP62805 103 aaKnown RBP7.23□□□□□ -1.25
CLIP1-210ENST00000538120 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
CLIP1-210ENST00000538120 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 DEFB131BA0A096LNP1 70 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 COX7CP15954 63 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 ESRGQ1W209 222 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
CLIP1-210ENST00000538120 H0YGX0 51 aa7.22□□□□□ -1.25
CLIP1-210ENST00000538120 CRYGAP11844 174 aa7.22□□□□□ -1.25
CLIP1-210ENST00000538120 hADV29S1A0JD25 119 aa7.21□□□□□ -1.26
CLIP1-210ENST00000538120 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
CLIP1-210ENST00000538120 KRTAP26-1Q6PEX3 210 aa7.19□□□□□ -1.26
CLIP1-210ENST00000538120 ATOX1O00244 68 aa7.19□□□□□ -1.26
CLIP1-210ENST00000538120 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
CLIP1-210ENST00000538120 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
CLIP1-210ENST00000538120 Q6JHZ5 121 aa7.18□□□□□ -1.26
CLIP1-210ENST00000538120 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
CLIP1-210ENST00000538120 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
CLIP1-210ENST00000538120 C9orf116Q5BN46 136 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-210ENST00000538120 C10orf25Q5T742 122 aa7.18□□□□□ -1.26
CLIP1-210ENST00000538120 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
CLIP1-210ENST00000538120 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
CLIP1-210ENST00000538120 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
CLIP1-210ENST00000538120 UNQ6190/PRO20217Q6UXQ8 127 aa7.17□□□□□ -1.26
CLIP1-210ENST00000538120 TRAV10A0A0B4J240 114 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms