RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 AKR1D1P51857 326 aa12.39□□□□□ -0.43
LTBR-205ENST00000535739 IGLV1-50A0A075B6I6 118 aa12.38□□□□□ -0.43
LTBR-205ENST00000535739 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
LTBR-205ENST00000535739 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
LTBR-205ENST00000535739 LOC105371267A0A1B0GV96 52 aa12.36□□□□□ -0.43
LTBR-205ENST00000535739 TMEM223A0PJW6 202 aa12.35□□□□□ -0.43
LTBR-205ENST00000535739 SPINK8P0C7L1 97 aa12.35□□□□□ -0.43
LTBR-205ENST00000535739 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
LTBR-205ENST00000535739 TOMM7Q9P0U1 55 aa12.35□□□□□ -0.43
LTBR-205ENST00000535739 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
LTBR-205ENST00000535739 PRSS2P07478 247 aa12.33□□□□□ -0.44
LTBR-205ENST00000535739 CKS1BP61024 79 aa12.32□□□□□ -0.44
LTBR-205ENST00000535739 HERVK_113P61574 105 aa12.31□□□□□ -0.44
LTBR-205ENST00000535739 C6orf226Q5I0X4 101 aa12.31□□□□□ -0.44
LTBR-205ENST00000535739 PYY3Q5JQD4 70 aa12.31□□□□□ -0.44
LTBR-205ENST00000535739 IGLV5-39A0A0G2JS06 123 aa12.3□□□□□ -0.44
LTBR-205ENST00000535739 Q8IZM0 81 aa12.3□□□□□ -0.44
LTBR-205ENST00000535739 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
LTBR-205ENST00000535739 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
LTBR-205ENST00000535739 C22orf24Q9Y442 160 aa12.29□□□□□ -0.44
LTBR-205ENST00000535739 ZNF861PO60384 105 aa12.28□□□□□ -0.44
LTBR-205ENST00000535739 PRR4Q16378 134 aa12.28□□□□□ -0.44
LTBR-205ENST00000535739 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.45
LTBR-205ENST00000535739 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
LTBR-205ENST00000535739 E9PLD3 99 aa12.26□□□□□ -0.45
LTBR-205ENST00000535739 LEPROTO15243 131 aa12.26□□□□□ -0.45
LTBR-205ENST00000535739 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
LTBR-205ENST00000535739 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
LTBR-205ENST00000535739 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
LTBR-205ENST00000535739 J3QQQ9 107 aa12.22□□□□□ -0.45
LTBR-205ENST00000535739 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
LTBR-205ENST00000535739 MRPL55Q7Z7F7 128 aaKnown RBP12.21□□□□□ -0.45
LTBR-205ENST00000535739 VAMP8Q9BV40 100 aa12.21□□□□□ -0.45
LTBR-205ENST00000535739 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
LTBR-205ENST00000535739 TSPEAR-AS2P59090 65 aa12.2□□□□□ -0.46
LTBR-205ENST00000535739 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
LTBR-205ENST00000535739 MUC2Q02817 5179 aa12.2□□□□□ -0.46
LTBR-205ENST00000535739 TSPAN13O95857 204 aa12.19□□□□□ -0.46
LTBR-205ENST00000535739 CXCL5P42830 114 aa12.19□□□□□ -0.46
LTBR-205ENST00000535739 NMUP48645 174 aa12.19□□□□□ -0.46
LTBR-205ENST00000535739 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
LTBR-205ENST00000535739 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
LTBR-205ENST00000535739 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
LTBR-205ENST00000535739 A0A087X002 238 aa12.17□□□□□ -0.46
LTBR-205ENST00000535739 BCE1O60756 84 aa12.17□□□□□ -0.46
LTBR-205ENST00000535739 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
LTBR-205ENST00000535739 SPATA45Q537H7 98 aa12.17□□□□□ -0.46
LTBR-205ENST00000535739 ZNF625Q96I27 306 aaPredicted RBP12.17□□□□□ -0.46
LTBR-205ENST00000535739 RPL37AP8A6NKH3 93 aa12.16□□□□□ -0.46
LTBR-205ENST00000535739 S100A12P80511 92 aa12.16□□□□□ -0.46
LTBR-205ENST00000535739 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
LTBR-205ENST00000535739 LINC00167Q96N53 147 aa12.16□□□□□ -0.46
LTBR-205ENST00000535739 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.46
LTBR-205ENST00000535739 PCP2Q8IVA1 136 aa12.14□□□□□ -0.47
LTBR-205ENST00000535739 TTTY13Q9BZ97 58 aa12.14□□□□□ -0.47
LTBR-205ENST00000535739 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
LTBR-205ENST00000535739 HERV-K104P63124 156 aa12.13□□□□□ -0.47
LTBR-205ENST00000535739 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
LTBR-205ENST00000535739 CRYGAP11844 174 aa12.12□□□□□ -0.47
LTBR-205ENST00000535739 TYMSOSQ8TAI1 123 aa12.12□□□□□ -0.47
LTBR-205ENST00000535739 ANAPC11Q9NYG5 84 aa12.11□□□□□ -0.47
LTBR-205ENST00000535739 COX8AP10176 69 aa12.1□□□□□ -0.47
LTBR-205ENST00000535739 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
LTBR-205ENST00000535739 C12orf57Q99622 126 aa12.09□□□□□ -0.47
LTBR-205ENST00000535739 IGLV5-37A0A075B6J1 123 aa12.08□□□□□ -0.48
LTBR-205ENST00000535739 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
LTBR-205ENST00000535739 BOD1L2Q8IYS8 172 aa12.08□□□□□ -0.48
LTBR-205ENST00000535739 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
LTBR-205ENST00000535739 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
LTBR-205ENST00000535739 DLEU1O43261 78 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 PFN2P35080 140 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 UBE2AP49459 152 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 KRTAP13-1Q8IUC0 172 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 LINC00518Q8N0U6 118 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
LTBR-205ENST00000535739 COX17Q14061 63 aa12.05□□□□□ -0.48
LTBR-205ENST00000535739 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
LTBR-205ENST00000535739 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
LTBR-205ENST00000535739 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
LTBR-205ENST00000535739 SMIM13P0DJ93 91 aa12.04□□□□□ -0.48
LTBR-205ENST00000535739 LINC00158P58513 81 aa12.04□□□□□ -0.48
LTBR-205ENST00000535739 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
LTBR-205ENST00000535739 A0A0U1RRA0 63 aa12.03□□□□□ -0.48
LTBR-205ENST00000535739 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
LTBR-205ENST00000535739 TIMM17BO60830 172 aa12.01□□□□□ -0.49
LTBR-205ENST00000535739 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
LTBR-205ENST00000535739 PRO1933Q9H354 126 aa12□□□□□ -0.49
LTBR-205ENST00000535739 A0A0U1RQV1 116 aa11.99□□□□□ -0.49
LTBR-205ENST00000535739 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
LTBR-205ENST00000535739 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
LTBR-205ENST00000535739 LITAFQ99732 161 aa11.99□□□□□ -0.49
LTBR-205ENST00000535739 UQCR10Q9UDW1 63 aa11.99□□□□□ -0.49
LTBR-205ENST00000535739 PRLHP81277 87 aa11.98□□□□□ -0.49
LTBR-205ENST00000535739 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
LTBR-205ENST00000535739 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
LTBR-205ENST00000535739 DAND5Q8N907 189 aa11.97□□□□□ -0.49
LTBR-205ENST00000535739 LINC00304Q8N9R0 145 aa11.97□□□□□ -0.49
LTBR-205ENST00000535739 VPREB1P12018 145 aa11.96□□□□□ -0.49
LTBR-205ENST00000535739 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms