RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 LINC00959A0A1B0GUT2 108 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 GRIFINA4D1Z8 144 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 F2Z2F3 143 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 G3V3Q6 166 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 COX7A2LO14548 114 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 NDUFA1O15239 70 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 TRGC1P0CF51 173 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 HRES1P13985 223 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 DDTP30046 118 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 S100A5P33763 92 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 SERF2P84101 59 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 SMIM15Q7Z3B0 74 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 OR10D4PQ8NGN7 298 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 AP1S3Q96PC3 154 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 TCEAL7Q9BRU2 100 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 CCDC32Q9BV29 185 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
SNHG1-202ENST00000535689 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 ARL2-SNX15V9GYD0 113 aa1.6□□□□□ -2.15
SNHG1-202ENST00000535689 TRBV24-1A0A075B6N3 115 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 TINCRA0A1B0GVN0 87 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 M0QY20 66 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 SPINK1P00995 79 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 LTAP01374 205 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 BCL2P10415 239 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 ATP6V0CP27449 155 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 XCL1P47992 114 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 RPS20P60866 119 aaKnown RBP1.59□□□□□ -2.15
SNHG1-202ENST00000535689 BATFQ16520 125 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 CENPWQ5EE01 88 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 SLC51BQ86UW2 128 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 GNB1LQ9BYB4 327 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 ALG5Q9Y673 324 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 R4GN34 69 aa1.59□□□□□ -2.15
SNHG1-202ENST00000535689 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 IGSF23A1L1A6 192 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 I3L3M4 83 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 SH2D1AO60880 128 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 IFNA1P01562 189 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 MGPP08493 103 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 GCHFRP30047 84 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 NKX2-5P52952 324 aaPredicted RBP1.58□□□□□ -2.16
SNHG1-202ENST00000535689 GNG5P63218 68 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 COX6B2Q6YFQ2 88 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 RETNLBQ9BQ08 111 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 BIN3Q9NQY0 253 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 TP73-AS1Q9UF72 201 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
SNHG1-202ENST00000535689 TMSB15BA0A087X1C1 80 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 A0A0B4J2C4 111 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 CCDC160A6NGH7 325 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 BCE1O60756 84 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 PPP1R17O96001 155 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 LGALS3P17931 250 aaKnown RBP1.57□□□□□ -2.16
SNHG1-202ENST00000535689 CRIP1P50238 77 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 RPS29P62273 56 aaKnown RBP1.57□□□□□ -2.16
SNHG1-202ENST00000535689 C4orf26Q17RF5 130 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 TRIQKQ629K1 86 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 LYZL1Q6UWQ5 148 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 FAM19A3Q7Z5A8 133 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 CDC42SE2Q9NRR3 84 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 TNFSF18Q9UNG2 199 aa1.57□□□□□ -2.16
SNHG1-202ENST00000535689 A0A1B0GV50 99 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 LINC00862A6NCI5 91 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 A8MWP4 228 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 SLC25A20O43772 301 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 S100A2P29034 98 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 MT1HP80294 61 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 SPAG11BQ08648 103 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 BAGE2Q86Y30 109 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 OR10AG1Q8NH19 301 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 PSMG3Q9BT73 122 aaPredicted RBP1.56□□□□□ -2.16
SNHG1-202ENST00000535689 MAP1LC3AQ9H492 121 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 SMDT1Q9H4I9 107 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 C22orf24Q9Y442 160 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 HSPB11Q9Y547 144 aa1.56□□□□□ -2.16
SNHG1-202ENST00000535689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-202ENST00000535689 TGIF2-C20orf24A0A0A6YYL0 155 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-202ENST00000535689 SDHAF1A6NFY7 115 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 ZNF727A8MUV8 499 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 FCER1GP30273 86 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 AKR1C3P42330 323 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 CKS1BP61024 79 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 C10orf91Q5T1B1 145 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 SSBP3-AS1Q7Z2R9 100 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 Q86TA4 180 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 ST20Q9HBF5 79 aa1.55□□□□□ -2.16
SNHG1-202ENST00000535689 BORCS7-ASMTA0A0B4J1R7 106 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 TRAV13-1A0A0B4J241 112 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 TRBV6-5A0A0K0K1A5 114 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 CTXND1A0A1B0GTU2 59 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 A0A1B0GU33 70 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 C7orf77A4D0Y5 90 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 PFDN1O60925 122 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 AKR1C8PQ5T2L2 129 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
SNHG1-202ENST00000535689 C9orf62Q8N4C0 152 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms