RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ATP5LO75964 103 aa6.45□□□□□ -1.38
CCDC60-202ENST00000535685 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
CCDC60-202ENST00000535685 RAB5BP61020 215 aa6.45□□□□□ -1.38
CCDC60-202ENST00000535685 LINC00167Q96N53 147 aa6.45□□□□□ -1.38
CCDC60-202ENST00000535685 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
CCDC60-202ENST00000535685 BCE1O60756 84 aa6.44□□□□□ -1.38
CCDC60-202ENST00000535685 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
CCDC60-202ENST00000535685 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
CCDC60-202ENST00000535685 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
CCDC60-202ENST00000535685 COX17Q14061 63 aa6.43□□□□□ -1.38
CCDC60-202ENST00000535685 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
CCDC60-202ENST00000535685 SFTA2Q6UW10 78 aa6.43□□□□□ -1.38
CCDC60-202ENST00000535685 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
CCDC60-202ENST00000535685 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
CCDC60-202ENST00000535685 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
CCDC60-202ENST00000535685 NDUFA6P56556 154 aa6.41□□□□□ -1.38
CCDC60-202ENST00000535685 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
CCDC60-202ENST00000535685 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
CCDC60-202ENST00000535685 C11orf86A6NJI1 115 aa6.4□□□□□ -1.38
CCDC60-202ENST00000535685 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
CCDC60-202ENST00000535685 CHCHD1Q96BP2 118 aaKnown RBP6.4□□□□□ -1.38
CCDC60-202ENST00000535685 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
CCDC60-202ENST00000535685 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
CCDC60-202ENST00000535685 RPL37AP8A6NKH3 93 aa6.39□□□□□ -1.39
CCDC60-202ENST00000535685 COLCA2A8K830 154 aa6.39□□□□□ -1.39
CCDC60-202ENST00000535685 VPREB1P12018 145 aa6.39□□□□□ -1.39
CCDC60-202ENST00000535685 PMCHL1Q16048 86 aa6.39□□□□□ -1.39
CCDC60-202ENST00000535685 ZNF625Q96I27 306 aaPredicted RBP6.39□□□□□ -1.39
CCDC60-202ENST00000535685 SND1-IT1Q9HBX3 110 aa6.39□□□□□ -1.39
CCDC60-202ENST00000535685 PFN2P35080 140 aa6.38□□□□□ -1.39
CCDC60-202ENST00000535685 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
CCDC60-202ENST00000535685 CBLN2Q8IUK8 224 aa6.38□□□□□ -1.39
CCDC60-202ENST00000535685 LPAP08519 4548 aa6.37□□□□□ -1.39
CCDC60-202ENST00000535685 A0A087X002 238 aa6.37□□□□□ -1.39
CCDC60-202ENST00000535685 CRYGAP11844 174 aa6.37□□□□□ -1.39
CCDC60-202ENST00000535685 FAM229BQ4G0N7 80 aa6.37□□□□□ -1.39
CCDC60-202ENST00000535685 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
CCDC60-202ENST00000535685 CHTOPQ9Y3Y2 248 aaKnown RBP6.37□□□□□ -1.39
CCDC60-202ENST00000535685 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
CCDC60-202ENST00000535685 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
CCDC60-202ENST00000535685 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
CCDC60-202ENST00000535685 UBE2AP49459 152 aa6.35□□□□□ -1.39
CCDC60-202ENST00000535685 CTAG1AP78358 180 aa6.35□□□□□ -1.39
CCDC60-202ENST00000535685 IGKV2-28A0A075B6P5 120 aa6.34□□□□□ -1.39
CCDC60-202ENST00000535685 IGKV2D-28P01615 120 aa6.34□□□□□ -1.39
CCDC60-202ENST00000535685 Q8NDZ9 215 aa6.34□□□□□ -1.39
CCDC60-202ENST00000535685 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
CCDC60-202ENST00000535685 TMEM126AQ9H061 195 aa6.34□□□□□ -1.39
CCDC60-202ENST00000535685 M0R378 163 aa6.33□□□□□ -1.4
CCDC60-202ENST00000535685 LINC00587B1AMM8 73 aa6.32□□□□□ -1.4
CCDC60-202ENST00000535685 LINC00158P58513 81 aa6.32□□□□□ -1.4
CCDC60-202ENST00000535685 HERV-K104P63124 156 aa6.32□□□□□ -1.4
CCDC60-202ENST00000535685 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
CCDC60-202ENST00000535685 LOC105371267A0A1B0GV96 52 aa6.31□□□□□ -1.4
CCDC60-202ENST00000535685 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
CCDC60-202ENST00000535685 HSBP1O75506 76 aa6.31□□□□□ -1.4
CCDC60-202ENST00000535685 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
CCDC60-202ENST00000535685 PRLHP81277 87 aa6.3□□□□□ -1.4
CCDC60-202ENST00000535685 PRR4Q16378 134 aa6.3□□□□□ -1.4
CCDC60-202ENST00000535685 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
CCDC60-202ENST00000535685 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
CCDC60-202ENST00000535685 IGKV2D-26A0A0A0MRZ7 120 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 LOC107984156A0A0G2JMH3 177 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 TRGC2P03986 189 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 ARL17AQ8IVW1 177 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
CCDC60-202ENST00000535685 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
CCDC60-202ENST00000535685 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
CCDC60-202ENST00000535685 TSPAN13O95857 204 aa6.28□□□□□ -1.4
CCDC60-202ENST00000535685 SMIM13P0DJ93 91 aa6.28□□□□□ -1.4
CCDC60-202ENST00000535685 SPRR1AP35321 89 aa6.28□□□□□ -1.4
CCDC60-202ENST00000535685 SERF1AO75920 110 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 PLNP26678 52 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 MIR7-3HGQ8N6C7 128 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 LINC00337Q8N6G1 96 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 KCNQ1DNQ9H478 68 aa6.27□□□□□ -1.41
CCDC60-202ENST00000535685 A0A0U1RRA0 63 aa6.26□□□□□ -1.41
CCDC60-202ENST00000535685 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
CCDC60-202ENST00000535685 LEPROTO15243 131 aa6.26□□□□□ -1.41
CCDC60-202ENST00000535685 MEIG1Q5JSS6 88 aa6.26□□□□□ -1.41
CCDC60-202ENST00000535685 BOD1L2Q8IYS8 172 aa6.26□□□□□ -1.41
CCDC60-202ENST00000535685 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
CCDC60-202ENST00000535685 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
CCDC60-202ENST00000535685 TRBV10-2A0A0K0K1G8 114 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 C5orf52A6NGY3 159 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 DPM2O94777 84 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 NMUP48645 174 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 HIGD2AQ9BW72 106 aa6.24□□□□□ -1.41
CCDC60-202ENST00000535685 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
CCDC60-202ENST00000535685 J3QQQ9 107 aa6.23□□□□□ -1.41
CCDC60-202ENST00000535685 SPAG11AQ6PDA7 123 aa6.23□□□□□ -1.41
CCDC60-202ENST00000535685 TRBV10-3A0A0K0K1G6 114 aa6.22□□□□□ -1.41
CCDC60-202ENST00000535685 HERVK_113P61574 105 aa6.22□□□□□ -1.41
CCDC60-202ENST00000535685 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
CCDC60-202ENST00000535685 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
CCDC60-202ENST00000535685 H0Y8G0 127 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms