RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SEC11AP67812 179 aa6.62□□□□□ -1.35
CLSTN3-206ENST00000535668 PRO1933Q9H354 126 aa6.62□□□□□ -1.35
CLSTN3-206ENST00000535668 C22orf24Q9Y442 160 aa6.62□□□□□ -1.35
CLSTN3-206ENST00000535668 IFI27L1Q96BM0 104 aa6.61□□□□□ -1.35
CLSTN3-206ENST00000535668 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
CLSTN3-206ENST00000535668 DLEU1O43261 78 aa6.6□□□□□ -1.35
CLSTN3-206ENST00000535668 CXCL5P42830 114 aa6.6□□□□□ -1.35
CLSTN3-206ENST00000535668 PAPPA-AS1Q5QFB9 102 aa6.6□□□□□ -1.35
CLSTN3-206ENST00000535668 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
CLSTN3-206ENST00000535668 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
CLSTN3-206ENST00000535668 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 F8VRH5 84 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 BCE1O60756 84 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 HERVK_113P63121 156 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 PRR4Q16378 134 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 TIMM17AQ99595 171 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 VCX2Q9H322 139 aa6.59□□□□□ -1.35
CLSTN3-206ENST00000535668 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 A0A087X002 238 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 CRYGAP11844 174 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 CKS1BP61024 79 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 SLC25A34Q6PIV7 304 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
CLSTN3-206ENST00000535668 LOC389332A0A1B0GUA5 103 aa6.57□□□□□ -1.36
CLSTN3-206ENST00000535668 PRSS2P07478 247 aa6.57□□□□□ -1.36
CLSTN3-206ENST00000535668 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
CLSTN3-206ENST00000535668 A0A096LNJ9 63 aa6.56□□□□□ -1.36
CLSTN3-206ENST00000535668 PLNP26678 52 aa6.56□□□□□ -1.36
CLSTN3-206ENST00000535668 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
CLSTN3-206ENST00000535668 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
CLSTN3-206ENST00000535668 COX8AP10176 69 aa6.55□□□□□ -1.36
CLSTN3-206ENST00000535668 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
CLSTN3-206ENST00000535668 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
CLSTN3-206ENST00000535668 ERASQ7Z444 233 aa6.54□□□□□ -1.36
CLSTN3-206ENST00000535668 LINC00167Q96N53 147 aa6.54□□□□□ -1.36
CLSTN3-206ENST00000535668 SNHG12Q9BXW3 62 aa6.54□□□□□ -1.36
CLSTN3-206ENST00000535668 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
CLSTN3-206ENST00000535668 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
CLSTN3-206ENST00000535668 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
CLSTN3-206ENST00000535668 DPM2O94777 84 aa6.53□□□□□ -1.36
CLSTN3-206ENST00000535668 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
CLSTN3-206ENST00000535668 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
CLSTN3-206ENST00000535668 IGKCP01834 107 aa6.52□□□□□ -1.37
CLSTN3-206ENST00000535668 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
CLSTN3-206ENST00000535668 HIGD1BQ9P298 99 aa6.52□□□□□ -1.37
CLSTN3-206ENST00000535668 LINC00469Q8N7U9 141 aa6.51□□□□□ -1.37
CLSTN3-206ENST00000535668 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
CLSTN3-206ENST00000535668 GEMIN7Q9H840 131 aaKnown RBP6.51□□□□□ -1.37
CLSTN3-206ENST00000535668 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
CLSTN3-206ENST00000535668 TAL2Q16559 108 aa6.5□□□□□ -1.37
CLSTN3-206ENST00000535668 TSPAN13O95857 204 aa6.49□□□□□ -1.37
CLSTN3-206ENST00000535668 ATOH7Q8N100 152 aa6.49□□□□□ -1.37
CLSTN3-206ENST00000535668 COX7B2Q8TF08 81 aa6.49□□□□□ -1.37
CLSTN3-206ENST00000535668 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
CLSTN3-206ENST00000535668 A6NDN8 102 aa6.48□□□□□ -1.37
CLSTN3-206ENST00000535668 HSD52Q0P140 79 aa6.48□□□□□ -1.37
CLSTN3-206ENST00000535668 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
CLSTN3-206ENST00000535668 CST9LQ9H4G1 147 aa6.48□□□□□ -1.37
CLSTN3-206ENST00000535668 HERVK_113P61574 105 aa6.47□□□□□ -1.37
CLSTN3-206ENST00000535668 COX17Q14061 63 aa6.47□□□□□ -1.37
CLSTN3-206ENST00000535668 PMVKQ15126 192 aa6.47□□□□□ -1.37
CLSTN3-206ENST00000535668 CHTOPQ9Y3Y2 248 aaKnown RBP6.47□□□□□ -1.37
CLSTN3-206ENST00000535668 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
CLSTN3-206ENST00000535668 H0Y8G0 127 aa6.46□□□□□ -1.38
CLSTN3-206ENST00000535668 VPREB1P12018 145 aa6.45□□□□□ -1.38
CLSTN3-206ENST00000535668 BVES-AS1Q5T3Y7 98 aa6.45□□□□□ -1.38
CLSTN3-206ENST00000535668 SPAG11AQ6PDA7 123 aa6.45□□□□□ -1.38
CLSTN3-206ENST00000535668 FP248Q71RG6 208 aaPredicted RBP6.45□□□□□ -1.38
CLSTN3-206ENST00000535668 PLEKHB2Q96CS7 222 aa6.45□□□□□ -1.38
CLSTN3-206ENST00000535668 A0A1B0GV90 55 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 E9PLD3 99 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 ANKRD39Q53RE8 183 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
CLSTN3-206ENST00000535668 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 C11orf86A6NJI1 115 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 H3BRM9 83 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 UBE2AP49459 152 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 TMEM126AQ9H061 195 aa6.43□□□□□ -1.38
CLSTN3-206ENST00000535668 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 M0R378 163 aa6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 NMUP48645 174 aa6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 HINT1P49773 126 aaPredicted RBP6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
CLSTN3-206ENST00000535668 GAGE10A6NGK3 116 aa6.41□□□□□ -1.38
CLSTN3-206ENST00000535668 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
CLSTN3-206ENST00000535668 BATFQ16520 125 aa6.41□□□□□ -1.38
CLSTN3-206ENST00000535668 SND1-IT1Q9HBX3 110 aa6.41□□□□□ -1.38
CLSTN3-206ENST00000535668 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
CLSTN3-206ENST00000535668 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
CLSTN3-206ENST00000535668 A6NJY4 79 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms