RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 GAGE2AQ6NT46 116 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CMTM1-220ENST00000534143 TIMM17AQ99595 171 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 OPRPNQ99935 248 aaPredicted RBP4.17□□□□□ -1.74
CMTM1-220ENST00000534143 CHCHD5Q9BSY4 110 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 LINC00588Q9Y4M8 146 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 IGLV4-3A0A075B6K6 122 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 INAFM2P0DMQ5 153 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 CCL18P55774 89 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
CMTM1-220ENST00000534143 AMELXQ99217 191 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 UPK3BQ9BT76 320 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 CDC42SE2Q9NRR3 84 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 FRAS1Q86XX4 4008 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 TENM2Q9NT68 2774 aa4.16□□□□□ -1.74
CMTM1-220ENST00000534143 A4D1N5 150 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 UBE2L6O14933 153 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 TMEM258P61165 79 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 CIRBPQ14011 172 aaKnown RBP4.15□□□□□ -1.75
CMTM1-220ENST00000534143 CASC10Q5T4H9 136 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
CMTM1-220ENST00000534143 DNAH10OSP0CZ25 163 aa4.14□□□□□ -1.75
CMTM1-220ENST00000534143 COX7CP15954 63 aa4.14□□□□□ -1.75
CMTM1-220ENST00000534143 HERVK_113P63121 156 aa4.14□□□□□ -1.75
CMTM1-220ENST00000534143 LINC01556Q5JQF7 62 aa4.14□□□□□ -1.75
CMTM1-220ENST00000534143 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
CMTM1-220ENST00000534143 KMT2AQ03164 3969 aa4.13□□□□□ -1.75
CMTM1-220ENST00000534143 TEX49A0A1B0GTD5 131 aa4.13□□□□□ -1.75
CMTM1-220ENST00000534143 RNASE13Q5GAN3 156 aaKnown RBP4.13□□□□□ -1.75
CMTM1-220ENST00000534143 FAM19A3Q7Z5A8 133 aa4.13□□□□□ -1.75
CMTM1-220ENST00000534143 PRR34Q9NV39 138 aa4.13□□□□□ -1.75
CMTM1-220ENST00000534143 LST1O00453 97 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 PRSS2P07478 247 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 IGHV3-30-3P0DP02 117 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 ENHOQ6UWT2 76 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 MUSTN1Q8IVN3 82 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 Q9H8V8 135 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 KLK12Q9UKR0 248 aa4.12□□□□□ -1.75
CMTM1-220ENST00000534143 IGLV4-69A0A075B6H9 119 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 A0A0J9YXV3 536 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 LINC00959A0A1B0GUT2 108 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 TMEM223A0PJW6 202 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 TIMM17BO60830 172 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 DNAL4O96015 105 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 ANGP03950 147 aaKnown RBP4.11□□□□□ -1.75
CMTM1-220ENST00000534143 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 CRYGAP11844 174 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 REG3AQ06141 175 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 LINC00242Q5T6M2 205 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 FAM19A5Q7Z5A7 132 aaPredicted RBP4.11□□□□□ -1.75
CMTM1-220ENST00000534143 UBE2DNLQ8IWF7 75 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 LINC00269Q8N2A0 174 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 DAND5Q8N907 189 aa4.11□□□□□ -1.75
CMTM1-220ENST00000534143 DNAH10Q8IVF4 4471 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 TRAV8-3A0A0A6YYJ7 113 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 TRAV13-1A0A0B4J241 112 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 LCE6AA0A183 80 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 NDUFC2-KCTD14E9PQ53 114 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 COX6A2Q02221 97 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 MIAQ16674 131 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 VPS13DQ5THJ4 4388 aa4.1□□□□□ -1.75
CMTM1-220ENST00000534143 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 NDUFC2O95298 119 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
CMTM1-220ENST00000534143 SS18Q15532 418 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 CLPSL2Q6UWE3 100 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
CMTM1-220ENST00000534143 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
CMTM1-220ENST00000534143 ZNF22P17026 224 aaPredicted RBP4.08□□□□□ -1.76
CMTM1-220ENST00000534143 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 CHCHD10Q8WYQ3 142 aaPredicted RBP4.08□□□□□ -1.76
CMTM1-220ENST00000534143 CDKN2A-AS1Q9UH64 79 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 HECTD4Q9Y4D8 3996 aa4.08□□□□□ -1.76
CMTM1-220ENST00000534143 DNAH6Q9C0G6 4158 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 IGLV10-54A0A075B6I4 117 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 COX7A2LO14548 114 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 CRPP02741 224 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
CMTM1-220ENST00000534143 Q6ZR54 194 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms