RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 SS18Q15532 418 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 ESRGQ1W209 222 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 WFDC10BQ8IUB3 73 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 CEND1Q8N111 149 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 ZNF625Q96I27 306 aaPredicted RBP3.83□□□□□ -1.8
CHKA-208ENST00000533910 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
CHKA-208ENST00000533910 IGKV3OR2-268A0A0C4DH90 116 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 TIMM17BO60830 172 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 FXYD2P54710 66 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 LINC01556Q5JQF7 62 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 Q6ZRP5 223 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 CHCHD10Q8WYQ3 142 aaPredicted RBP3.82□□□□□ -1.8
CHKA-208ENST00000533910 LITAFQ99732 161 aa3.82□□□□□ -1.8
CHKA-208ENST00000533910 IGHV3-30P01768 117 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 IGHV3-30-5P0DP03 117 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 XCL1P47992 114 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 ENHOQ6UWT2 76 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 UPK3BQ9BT76 320 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 SPANXDQ9BXN6 97 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 KLK12Q9UKR0 248 aa3.81□□□□□ -1.8
CHKA-208ENST00000533910 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
CHKA-208ENST00000533910 H0Y9J4 135 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 J3QR89 54 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 COX7A2LO14548 114 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 IGHV3-33P01772 117 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 MIAQ16674 131 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 C5orf38Q86SI9 138 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 Q8IZM0 81 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 LINC00588Q9Y4M8 146 aa3.8□□□□□ -1.8
CHKA-208ENST00000533910 FBN3Q75N90 2809 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 DYNC2H1Q8NCM8 4307 aaKnown RBP3.79□□□□□ -1.8
CHKA-208ENST00000533910 IGLV10-54A0A075B6I4 117 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 IGLL5B9A064 214 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 CRPP02741 224 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 PSMB2P49721 201 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 CCL18P55774 89 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
CHKA-208ENST00000533910 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 Q6ZRU5 148 aa3.79□□□□□ -1.8
CHKA-208ENST00000533910 A0A087X002 238 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 NUPR2A6NF83 97 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 K7ERJ3 54 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 IFITM1P13164 125 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 CXCL5P42830 114 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 KIAA0087Q14695 138 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 ADAMTSL4-AS1Q5T5F5 129 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 UBE2WQ96B02 151 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 NHP2Q9NX24 153 aaKnown RBP3.78□□□□□ -1.8
CHKA-208ENST00000533910 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
CHKA-208ENST00000533910 KLK5Q9Y337 293 aaPredicted RBP3.78□□□□□ -1.8
CHKA-208ENST00000533910 A0A0B4J2C4 111 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 IBA57-AS1B1ANH7 110 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 NDUFS5O43920 106 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 APOMO95445 188 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 CIRBPQ14011 172 aaKnown RBP3.77□□□□□ -1.81
CHKA-208ENST00000533910 MUSTN1Q8IVN3 82 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 KRTAP1-5Q9BYS1 174 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 TOMM7Q9P0U1 55 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 CSMD3Q7Z407 3707 aa3.77□□□□□ -1.81
CHKA-208ENST00000533910 A0A087WYN8 130 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
CHKA-208ENST00000533910 SPAG11BQ08648 103 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 MEIG1Q5JSS6 88 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 GTF2H5Q6ZYL4 71 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 LINC00308Q8TCZ7 52 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 COPS9Q8WXC6 57 aa3.76□□□□□ -1.81
CHKA-208ENST00000533910 DNAH7Q8WXX0 4024 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
CHKA-208ENST00000533910 PSPHP1O15172 72 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 CFC1P0CG37 223 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 C2orf82Q6UX34 121 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 SOSTDC1Q6X4U4 206 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 DAND5Q8N907 189 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 C15orf56Q8N910 161 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 MUC7Q8TAX7 377 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 STARD9Q9P2P6 4700 aa3.75□□□□□ -1.81
CHKA-208ENST00000533910 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
CHKA-208ENST00000533910 DNAH1Q9P2D7 4330 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 H3BUT2 72 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 COX17Q14061 63 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 MIR7-3HGQ8N6C7 128 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 RAB37Q96AX2 223 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 RMI2Q96E14 147 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 IMUPQ9GZP8 106 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 PRO1854Q9UHT4 67 aa3.74□□□□□ -1.81
CHKA-208ENST00000533910 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms