RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SMR3AQ99954 134 aa4.88□□□□□ -1.63
CTNND1-236ENST00000533667 KLKP1Q107X0 134 aa4.88□□□□□ -1.63
CTNND1-236ENST00000533667 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
CTNND1-236ENST00000533667 LAMA2P24043 3122 aaKnown RBP4.88□□□□□ -1.63
CTNND1-236ENST00000533667 KLK9Q2XQG4 91 aa4.88□□□□□ -1.63
CTNND1-236ENST00000533667 IGF2RP11717 2491 aa4.88□□□□□ -1.63
CTNND1-236ENST00000533667 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 NCOR2Q9Y618 2525 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 SPATA3Q8NHX4 192 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 SMCR5Q8TEV8 140 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 TLN1Q9Y490 2541 aaKnown RBP4.87□□□□□ -1.63
CTNND1-236ENST00000533667 FHL3Q13643 280 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 C1orf134Q5TEV5 83 aa4.87□□□□□ -1.63
CTNND1-236ENST00000533667 ABCA2Q9BZC7 2435 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 AGRNO00468 2067 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 H3BPC8 53 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 PIEZO2Q9H5I5 2752 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 TNRC18O15417 2968 aaPredicted RBP4.86□□□□□ -1.63
CTNND1-236ENST00000533667 C1orf64Q8NEQ6 169 aa4.86□□□□□ -1.63
CTNND1-236ENST00000533667 A8MTW9 85 aa4.85□□□□□ -1.63
CTNND1-236ENST00000533667 KIAA0087Q14695 138 aa4.85□□□□□ -1.63
CTNND1-236ENST00000533667 ELOF1P60002 83 aaKnown RBP4.85□□□□□ -1.63
CTNND1-236ENST00000533667 EYSQ5T1H1 3165 aa4.85□□□□□ -1.63
CTNND1-236ENST00000533667 PRLHP81277 87 aa4.84□□□□□ -1.63
CTNND1-236ENST00000533667 C6orf48Q9UBA6 75 aa4.84□□□□□ -1.63
CTNND1-236ENST00000533667 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
CTNND1-236ENST00000533667 A8MUN3 132 aa4.83□□□□□ -1.64
CTNND1-236ENST00000533667 Q6ZQT0 140 aa4.83□□□□□ -1.64
CTNND1-236ENST00000533667 LINC00167Q96N53 147 aa4.83□□□□□ -1.64
CTNND1-236ENST00000533667 TET2Q6N021 2002 aaPredicted RBP4.83□□□□□ -1.64
CTNND1-236ENST00000533667 FSHBP01225 129 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 DEFB116Q30KQ4 102 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 Q8NBF4 154 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 LAMA3Q16787 3333 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 GVQW2A0A096LPI5 108 aaPredicted RBP4.82□□□□□ -1.64
CTNND1-236ENST00000533667 H7BZZ5 65 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 Q5XG85 94 aa4.82□□□□□ -1.64
CTNND1-236ENST00000533667 X6R8D5 127 aa4.81□□□□□ -1.64
CTNND1-236ENST00000533667 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
CTNND1-236ENST00000533667 Q6ZRX8 168 aa4.81□□□□□ -1.64
CTNND1-236ENST00000533667 SPTBN5Q9NRC6 3674 aaKnown RBP4.8□□□□□ -1.64
CTNND1-236ENST00000533667 ACYP2P14621 99 aa4.8□□□□□ -1.64
CTNND1-236ENST00000533667 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
CTNND1-236ENST00000533667 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
CTNND1-236ENST00000533667 CDH23Q9H251 3354 aa4.8□□□□□ -1.64
CTNND1-236ENST00000533667 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
CTNND1-236ENST00000533667 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
CTNND1-236ENST00000533667 A0A1B0GU69 56 aa4.79□□□□□ -1.64
CTNND1-236ENST00000533667 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
CTNND1-236ENST00000533667 COL4A2P08572 1712 aa4.79□□□□□ -1.64
CTNND1-236ENST00000533667 Q1T7F1 81 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 LITAFQ99732 161 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 DOPEY1Q5JWR5 2465 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 XIRP2A4UGR9 3374 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 PTPRBP23467 1997 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 SPINK1P00995 79 aa4.78□□□□□ -1.64
CTNND1-236ENST00000533667 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
CTNND1-236ENST00000533667 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
CTNND1-236ENST00000533667 ABCA12Q86UK0 2595 aa4.77□□□□□ -1.65
CTNND1-236ENST00000533667 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
CTNND1-236ENST00000533667 USP9XQ93008 2570 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-236ENST00000533667 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 MOBPQ13875 183 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 PRUNE2Q8WUY3 3088 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 Q8NAQ8 132 aa4.76□□□□□ -1.65
CTNND1-236ENST00000533667 SZT2Q5T011 3432 aa4.75□□□□□ -1.65
CTNND1-236ENST00000533667 COL27A1Q8IZC6 1860 aaPredicted RBP4.75□□□□□ -1.65
CTNND1-236ENST00000533667 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
CTNND1-236ENST00000533667 EPM2AB3EWF7 344 aa4.74□□□□□ -1.65
CTNND1-236ENST00000533667 LRRK2Q5S007 2527 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 DNAH10OSP0CZ25 163 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 FN1P02751 2386 aaKnown RBP4.73□□□□□ -1.65
CTNND1-236ENST00000533667 JMJD1CQ15652 2540 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 Q6ZRP5 223 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 MUC3AQ02505 3323 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 NBDYA0A0U1RRE5 68 aa4.73□□□□□ -1.65
CTNND1-236ENST00000533667 LINC00313P59037 77 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
CTNND1-236ENST00000533667 A8MWP4 228 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 MUC4Q99102 2169 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 KCNQ1DNQ9H478 68 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
CTNND1-236ENST00000533667 ZFYVE26Q68DK2 2539 aa4.71□□□□□ -1.66
CTNND1-236ENST00000533667 UQCR11O14957 56 aa4.71□□□□□ -1.66
CTNND1-236ENST00000533667 RTL8CO15255 209 aa4.71□□□□□ -1.66
CTNND1-236ENST00000533667 ST20-AS1Q8NBB2 130 aa4.71□□□□□ -1.66
CTNND1-236ENST00000533667 FAM229AH3BQW9 127 aa4.7□□□□□ -1.66
CTNND1-236ENST00000533667 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
CTNND1-236ENST00000533667 USP34Q70CQ2 3546 aa4.7□□□□□ -1.66
CTNND1-236ENST00000533667 LINC00528Q8N1L1 170 aa4.7□□□□□ -1.66
CTNND1-236ENST00000533667 CSNK1G2-AS1Q8NCQ2 148 aa4.7□□□□□ -1.66
CTNND1-236ENST00000533667 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
CTNND1-236ENST00000533667 ANKRD11Q6UB99 2663 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms