RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 H0Y9P7 68 aa10.2□□□□□ -0.78
PCDHA9-202ENST00000532602 A0A087WVE0 104 aa10.19□□□□□ -0.78
PCDHA9-202ENST00000532602 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
PCDHA9-202ENST00000532602 PCOTHQ58A44 107 aa10.19□□□□□ -0.78
PCDHA9-202ENST00000532602 NBDYA0A0U1RRE5 68 aa10.19□□□□□ -0.78
PCDHA9-202ENST00000532602 WWC2-AS2Q96NR7 200 aa10.18□□□□□ -0.78
PCDHA9-202ENST00000532602 MUC4Q99102 2169 aa10.18□□□□□ -0.78
PCDHA9-202ENST00000532602 LINC00315P59091 139 aa10.18□□□□□ -0.78
PCDHA9-202ENST00000532602 TRBV7-7A0A0K0K1E9 115 aa10.18□□□□□ -0.78
PCDHA9-202ENST00000532602 EPG5Q9HCE0 2579 aa10.18□□□□□ -0.78
PCDHA9-202ENST00000532602 ACANP16112 2415 aa10.17□□□□□ -0.78
PCDHA9-202ENST00000532602 A0A0U1RQV1 116 aa10.17□□□□□ -0.78
PCDHA9-202ENST00000532602 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
PCDHA9-202ENST00000532602 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
PCDHA9-202ENST00000532602 SPINK1P00995 79 aa10.16□□□□□ -0.78
PCDHA9-202ENST00000532602 CRYGAP11844 174 aa10.15□□□□□ -0.79
PCDHA9-202ENST00000532602 SPACA4Q8TDM5 124 aa10.15□□□□□ -0.79
PCDHA9-202ENST00000532602 KIAA0087Q14695 138 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 Q6ZRP5 223 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 RTL8CO15255 209 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 MOBPQ13875 183 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
PCDHA9-202ENST00000532602 A0A1B0GW54 56 aa10.13□□□□□ -0.79
PCDHA9-202ENST00000532602 IGLV5-45A0A087WSX0 123 aa10.13□□□□□ -0.79
PCDHA9-202ENST00000532602 CXCL6P80162 114 aa10.13□□□□□ -0.79
PCDHA9-202ENST00000532602 Q8NAQ8 132 aa10.13□□□□□ -0.79
PCDHA9-202ENST00000532602 ANKRD17O75179 2603 aaKnown RBP10.12□□□□□ -0.79
PCDHA9-202ENST00000532602 IGKV2D-30A0A075B6S6 120 aa10.11□□□□□ -0.79
PCDHA9-202ENST00000532602 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
PCDHA9-202ENST00000532602 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
PCDHA9-202ENST00000532602 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
PCDHA9-202ENST00000532602 TMEM254Q8TBM7 123 aa10.11□□□□□ -0.79
PCDHA9-202ENST00000532602 TP53AIP1Q9HCN2 124 aa10.1□□□□□ -0.79
PCDHA9-202ENST00000532602 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
PCDHA9-202ENST00000532602 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
PCDHA9-202ENST00000532602 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
PCDHA9-202ENST00000532602 Q8NBF4 154 aa10.08□□□□□ -0.8
PCDHA9-202ENST00000532602 PHF5AQ7RTV0 110 aaKnown RBP10.08□□□□□ -0.8
PCDHA9-202ENST00000532602 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
PCDHA9-202ENST00000532602 C1orf64Q8NEQ6 169 aa10.08□□□□□ -0.8
PCDHA9-202ENST00000532602 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
PCDHA9-202ENST00000532602 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
PCDHA9-202ENST00000532602 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
PCDHA9-202ENST00000532602 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
PCDHA9-202ENST00000532602 Q6ZRX8 168 aa10.06□□□□□ -0.8
PCDHA9-202ENST00000532602 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
PCDHA9-202ENST00000532602 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
PCDHA9-202ENST00000532602 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
PCDHA9-202ENST00000532602 SOSTDC1Q6X4U4 206 aa10.04□□□□□ -0.8
PCDHA9-202ENST00000532602 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
PCDHA9-202ENST00000532602 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
PCDHA9-202ENST00000532602 A0A096LNT2 108 aa10.03□□□□□ -0.8
PCDHA9-202ENST00000532602 EPM2AB3EWF7 344 aa10.03□□□□□ -0.8
PCDHA9-202ENST00000532602 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
PCDHA9-202ENST00000532602 K7EIL1 84 aa10.01□□□□□ -0.81
PCDHA9-202ENST00000532602 BCE1O60756 84 aa10□□□□□ -0.81
PCDHA9-202ENST00000532602 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
PCDHA9-202ENST00000532602 HTTP42858 3142 aa9.99□□□□□ -0.81
PCDHA9-202ENST00000532602 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
PCDHA9-202ENST00000532602 J3QL48 77 aa9.98□□□□□ -0.81
PCDHA9-202ENST00000532602 BRCA2P51587 3418 aa9.97□□□□□ -0.81
PCDHA9-202ENST00000532602 LINC00313P59037 77 aa9.97□□□□□ -0.81
PCDHA9-202ENST00000532602 PMAIP1Q13794 54 aa9.96□□□□□ -0.81
PCDHA9-202ENST00000532602 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
PCDHA9-202ENST00000532602 ACYP2P14621 99 aa9.96□□□□□ -0.82
PCDHA9-202ENST00000532602 C1orf195Q5TG92 126 aa9.95□□□□□ -0.82
PCDHA9-202ENST00000532602 H3BPC8 53 aa9.95□□□□□ -0.82
PCDHA9-202ENST00000532602 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
PCDHA9-202ENST00000532602 KRTAP1-3Q8IUG1 177 aa9.95□□□□□ -0.82
PCDHA9-202ENST00000532602 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
PCDHA9-202ENST00000532602 PSPHP1O15172 72 aa9.93□□□□□ -0.82
PCDHA9-202ENST00000532602 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
PCDHA9-202ENST00000532602 ATP11AUNQ6ZP68 121 aa9.92□□□□□ -0.82
PCDHA9-202ENST00000532602 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
PCDHA9-202ENST00000532602 ST20-AS1Q8NBB2 130 aa9.92□□□□□ -0.82
PCDHA9-202ENST00000532602 LAMA3Q16787 3333 aa9.91□□□□□ -0.82
PCDHA9-202ENST00000532602 A0A1B0GU69 56 aa9.9□□□□□ -0.82
PCDHA9-202ENST00000532602 Q6ZQT0 140 aa9.9□□□□□ -0.82
PCDHA9-202ENST00000532602 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
PCDHA9-202ENST00000532602 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
PCDHA9-202ENST00000532602 VPREB1P12018 145 aa9.89□□□□□ -0.83
PCDHA9-202ENST00000532602 TRAV22A0A0B4J277 110 aa9.89□□□□□ -0.83
PCDHA9-202ENST00000532602 MGAM2Q2M2H8 2515 aa9.88□□□□□ -0.83
PCDHA9-202ENST00000532602 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
PCDHA9-202ENST00000532602 HECTD1Q9ULT8 2610 aa9.87□□□□□ -0.83
PCDHA9-202ENST00000532602 Q96NJ1 140 aa9.86□□□□□ -0.83
PCDHA9-202ENST00000532602 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
PCDHA9-202ENST00000532602 KRTAP1-1Q07627 177 aa9.84□□□□□ -0.83
PCDHA9-202ENST00000532602 GIG44P09565 113 aaPredicted RBP9.84□□□□□ -0.83
PCDHA9-202ENST00000532602 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
PCDHA9-202ENST00000532602 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
PCDHA9-202ENST00000532602 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
PCDHA9-202ENST00000532602 RANBP2P49792 3224 aaKnown RBP9.83□□□□□ -0.84
PCDHA9-202ENST00000532602 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
PCDHA9-202ENST00000532602 LOC101927531A0A1B0GV80 90 aa9.82□□□□□ -0.84
PCDHA9-202ENST00000532602 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
PCDHA9-202ENST00000532602 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
PCDHA9-202ENST00000532602 PRR34Q9NV39 138 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms