RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 CAMK2N2Q96S95 79 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 CDKN2A-AS1Q9UH64 79 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 SPTBN2O15020 2390 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 FRYQ5TBA9 3013 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 ZNF292O60281 2723 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV4-30-2A0A087WSY4 118 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 LINC00575Q6W349 94 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 DPM3Q9P2X0 92 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 CCL26Q9Y258 94 aa3.1□□□□□ -1.91
ECHDC1-221ENST00000531582 PTPRQQ9UMZ3 2332 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 TPRP12270 2363 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 EP300Q09472 2414 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-66A0A0C4DH42 116 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 K7EIM0 57 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 RNASE3P12724 160 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 CCL18P55774 89 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 SPINK7P58062 85 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 HIGD2BQ4VC39 106 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 C1orf137Q5JT78 98 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 CASC10Q5T4H9 136 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 Q6ZR54 194 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
ECHDC1-221ENST00000531582 CACNA1AO00555 2505 aa3.09□□□□□ -1.92
ECHDC1-221ENST00000531582 CACNA1BQ00975 2339 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 ZZEF1O43149 2961 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 GVINP1Q7Z2Y8 2422 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 IGLV11-55A0A075B6I3 123 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 IGHV3-64DA0A0J9YX35 117 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 MRPL33O75394 65 aaKnown RBP3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 LINC00158P58513 81 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 DEFB112Q30KQ8 113 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 C9orf163Q8N9P6 203 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 LEAP2Q969E1 77 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 SPRR4Q96PI1 79 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 CNTRLQ7Z7A1 2325 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 CACNA1GO43497 2377 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 FREM2Q5SZK8 3169 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 CEP250Q9BV73 2442 aa3.08□□□□□ -1.92
ECHDC1-221ENST00000531582 URB1O60287 2271 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 UQCR11O14957 56 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 PRR4Q16378 134 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 MRGPRG-AS1Q2M3A8 158 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 LYPD2Q6UXB3 125 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 DEC1Q9P2X7 70 aa3.07□□□□□ -1.92
ECHDC1-221ENST00000531582 IGLV1-50A0A075B6I6 118 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 KRTAP4-16G5E9R7 235 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 EGFEM1PQ0D2K5 195 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 COX17Q14061 63 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 KLK9Q2XQG4 91 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 LINC00483Q53H64 154 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 NAV3Q8IVL0 2385 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 LINC00612Q8N6U2 182 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 EPG5Q9HCE0 2579 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 C8orf17Q9NRJ1 99 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 PRR34Q9NV39 138 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 FAM215AQ9Y5M1 114 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 DMXL2Q8TDJ6 3036 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 NBEAQ8NFP9 2946 aa3.06□□□□□ -1.92
ECHDC1-221ENST00000531582 NCOR2Q9Y618 2525 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 MAP1BP46821 2468 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 SDK1Q7Z5N4 2213 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 SORL1Q92673 2214 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 CHD8Q9HCK8 2581 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 A0A096LNT2 108 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 A8MWP4 228 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 M0R2N4 97 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 CMC4P56277 68 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 KRTAP24-1Q3LI83 254 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 C10orf55Q5SWW7 151 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 Q6ZQY7 126 aa3.05□□□□□ -1.92
ECHDC1-221ENST00000531582 ASCC3Q8N3C0 2202 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 DEFB131BA0A096LNP1 70 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 C20orf166-AS1Q96NR2 134 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 GPR179Q6PRD1 2367 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 OTOGLQ3ZCN5 2332 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 BSNQ9UPA5 3926 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 NBPF19A0A087WUL8 3843 aa3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 KMT2BQ9UMN6 2715 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-221ENST00000531582 ACACBO00763 2458 aa3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 CNOT1A5YKK6 2376 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 CACNA1EQ15878 2313 aa3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 CHD6Q8TD26 2715 aa3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 CYSRT1A8MQ03 144 aa3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 TMEM105Q8N8V8 129 aa3.03□□□□□ -1.92
ECHDC1-221ENST00000531582 P0C880 135 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 COX6A2Q02221 97 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 DEFB110Q30KQ9 67 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 PRR9Q5T870 116 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 KRTAP26-1Q6PEX3 210 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
ECHDC1-221ENST00000531582 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms