RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 C3orf22Q8N5N4 141 aa8.63□□□□□ -1.03
SCN3B-206ENST00000530277 FSHBP01225 129 aa8.63□□□□□ -1.03
SCN3B-206ENST00000530277 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
SCN3B-206ENST00000530277 LITAFQ99732 161 aa8.62□□□□□ -1.03
SCN3B-206ENST00000530277 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
SCN3B-206ENST00000530277 COX7BP24311 80 aa8.62□□□□□ -1.03
SCN3B-206ENST00000530277 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
SCN3B-206ENST00000530277 UQCRQO14949 82 aa8.61□□□□□ -1.03
SCN3B-206ENST00000530277 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
SCN3B-206ENST00000530277 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
SCN3B-206ENST00000530277 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
SCN3B-206ENST00000530277 Q8IZM0 81 aa8.6□□□□□ -1.03
SCN3B-206ENST00000530277 TRBV10-3A0A0K0K1G6 114 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 LELP1Q5T871 98 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 NREPQ16612 68 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
SCN3B-206ENST00000530277 ATOX1O00244 68 aa8.58□□□□□ -1.04
SCN3B-206ENST00000530277 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
SCN3B-206ENST00000530277 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
SCN3B-206ENST00000530277 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
SCN3B-206ENST00000530277 X6R8D5 127 aa8.57□□□□□ -1.04
SCN3B-206ENST00000530277 CR1P17927 2039 aa8.56□□□□□ -1.04
SCN3B-206ENST00000530277 SYCNQ0VAF6 134 aa8.56□□□□□ -1.04
SCN3B-206ENST00000530277 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
SCN3B-206ENST00000530277 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 CCKP06307 115 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 MPLKIPQ8TAP9 179 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 C16orf95Q9H693 158 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
SCN3B-206ENST00000530277 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
SCN3B-206ENST00000530277 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
SCN3B-206ENST00000530277 Q8N814 137 aa8.54□□□□□ -1.04
SCN3B-206ENST00000530277 M0R2N4 97 aa8.53□□□□□ -1.04
SCN3B-206ENST00000530277 ZNF73O43830 326 aaPredicted RBP8.53□□□□□ -1.04
SCN3B-206ENST00000530277 COX7CP15954 63 aa8.53□□□□□ -1.04
SCN3B-206ENST00000530277 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
SCN3B-206ENST00000530277 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
SCN3B-206ENST00000530277 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
SCN3B-206ENST00000530277 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
SCN3B-206ENST00000530277 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
SCN3B-206ENST00000530277 RMI2Q96E14 147 aa8.51□□□□□ -1.05
SCN3B-206ENST00000530277 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
SCN3B-206ENST00000530277 Q6ZRU5 148 aa8.5□□□□□ -1.05
SCN3B-206ENST00000530277 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
SCN3B-206ENST00000530277 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
SCN3B-206ENST00000530277 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
SCN3B-206ENST00000530277 Q6Q795 121 aa8.49□□□□□ -1.05
SCN3B-206ENST00000530277 SBSPONQ8IVN8 264 aa8.48□□□□□ -1.05
SCN3B-206ENST00000530277 Q8N9L7 120 aa8.48□□□□□ -1.05
SCN3B-206ENST00000530277 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
SCN3B-206ENST00000530277 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
SCN3B-206ENST00000530277 BPY2O14599 106 aa8.48□□□□□ -1.05
SCN3B-206ENST00000530277 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
SCN3B-206ENST00000530277 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.05
SCN3B-206ENST00000530277 PRR4Q16378 134 aa8.46□□□□□ -1.05
SCN3B-206ENST00000530277 SMCR5Q8TEV8 140 aa8.46□□□□□ -1.05
SCN3B-206ENST00000530277 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
SCN3B-206ENST00000530277 ESRGQ1W209 222 aa8.46□□□□□ -1.06
SCN3B-206ENST00000530277 UBE2AP49459 152 aa8.45□□□□□ -1.06
SCN3B-206ENST00000530277 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
SCN3B-206ENST00000530277 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
SCN3B-206ENST00000530277 COX17Q14061 63 aa8.44□□□□□ -1.06
SCN3B-206ENST00000530277 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
SCN3B-206ENST00000530277 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
SCN3B-206ENST00000530277 M0R378 163 aa8.43□□□□□ -1.06
SCN3B-206ENST00000530277 KRTAP1-1Q07627 177 aa8.43□□□□□ -1.06
SCN3B-206ENST00000530277 NDUFS5O43920 106 aa8.42□□□□□ -1.06
SCN3B-206ENST00000530277 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
SCN3B-206ENST00000530277 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
SCN3B-206ENST00000530277 Q8NAQ8 132 aa8.42□□□□□ -1.06
SCN3B-206ENST00000530277 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
SCN3B-206ENST00000530277 LINC00575Q6W349 94 aa8.41□□□□□ -1.06
SCN3B-206ENST00000530277 TRAV10A0A0B4J240 114 aa8.41□□□□□ -1.06
SCN3B-206ENST00000530277 PDZD2O15018 2839 aa8.41□□□□□ -1.06
SCN3B-206ENST00000530277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
SCN3B-206ENST00000530277 IMUPQ9GZP8 106 aa8.4□□□□□ -1.07
SCN3B-206ENST00000530277 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 KRTAP24-1Q3LI83 254 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 VWFP04275 2813 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
SCN3B-206ENST00000530277 TRBV7-7A0A0K0K1E9 115 aa8.38□□□□□ -1.07
SCN3B-206ENST00000530277 H0Y9J4 135 aa8.38□□□□□ -1.07
SCN3B-206ENST00000530277 TMEM258P61165 79 aa8.38□□□□□ -1.07
SCN3B-206ENST00000530277 Q6JHZ5 121 aa8.38□□□□□ -1.07
SCN3B-206ENST00000530277 IL17DQ8TAD2 202 aa8.37□□□□□ -1.07
SCN3B-206ENST00000530277 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
SCN3B-206ENST00000530277 PRLHP81277 87 aa8.36□□□□□ -1.07
SCN3B-206ENST00000530277 PDE6GP18545 87 aa8.36□□□□□ -1.07
SCN3B-206ENST00000530277 Q6ZVQ6 151 aa8.36□□□□□ -1.07
SCN3B-206ENST00000530277 NDUFC2O95298 119 aa8.35□□□□□ -1.07
SCN3B-206ENST00000530277 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
SCN3B-206ENST00000530277 MUC7Q8TAX7 377 aa8.34□□□□□ -1.07
SCN3B-206ENST00000530277 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SCN3B-206ENST00000530277 BSNQ9UPA5 3926 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms