RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.86□□□□□ -1.15
TRAF3IP2-211ENST00000528599 PGPEP1Q9NXJ5 209 aa7.86□□□□□ -1.15
TRAF3IP2-211ENST00000528599 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 CFC1P0CG37 223 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 IFITM1P13164 125 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 HERV-K104P63124 156 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 CIRBPQ14011 172 aaKnown RBP7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 SPCS1Q9Y6A9 102 aa7.85□□□□□ -1.15
TRAF3IP2-211ENST00000528599 A0A0B4J2C4 111 aa7.84□□□□□ -1.15
TRAF3IP2-211ENST00000528599 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 A4D1N5 150 aa7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 NAA38Q9BRA0 125 aaKnown RBP7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
TRAF3IP2-211ENST00000528599 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
TRAF3IP2-211ENST00000528599 COPS9Q8WXC6 57 aa7.82□□□□□ -1.16
TRAF3IP2-211ENST00000528599 SDIM1Q6ZPB5 146 aa7.81□□□□□ -1.16
TRAF3IP2-211ENST00000528599 TSPAN13O95857 204 aa7.8□□□□□ -1.16
TRAF3IP2-211ENST00000528599 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
TRAF3IP2-211ENST00000528599 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
TRAF3IP2-211ENST00000528599 PFN2P35080 140 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 A0A0U1RRA0 63 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 Q6ZRP5 223 aa7.79□□□□□ -1.16
TRAF3IP2-211ENST00000528599 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
TRAF3IP2-211ENST00000528599 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
TRAF3IP2-211ENST00000528599 EIF4EBP3O60516 100 aaPredicted RBP7.78□□□□□ -1.16
TRAF3IP2-211ENST00000528599 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
TRAF3IP2-211ENST00000528599 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
TRAF3IP2-211ENST00000528599 TRBV20-1A0A075B6N2 111 aa7.77□□□□□ -1.17
TRAF3IP2-211ENST00000528599 A0A096LNI7 61 aa7.77□□□□□ -1.17
TRAF3IP2-211ENST00000528599 F8W1H4 67 aa7.77□□□□□ -1.17
TRAF3IP2-211ENST00000528599 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
TRAF3IP2-211ENST00000528599 PANO1I0J062 215 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 CHTF8P0CG12 524 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 LINC00158P58513 81 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 HSPG2P98160 4391 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 COX17Q14061 63 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 GAGE2EQ4V326 116 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 GAGE2DQ9UEU5 116 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 HERC2O95714 4834 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
TRAF3IP2-211ENST00000528599 RYR1P21817 5038 aa7.75□□□□□ -1.17
TRAF3IP2-211ENST00000528599 DAND5Q8N907 189 aa7.75□□□□□ -1.17
TRAF3IP2-211ENST00000528599 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
TRAF3IP2-211ENST00000528599 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
TRAF3IP2-211ENST00000528599 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
TRAF3IP2-211ENST00000528599 PKIGQ9Y2B9 76 aa7.74□□□□□ -1.17
TRAF3IP2-211ENST00000528599 LOC107984156A0A0G2JMH3 177 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 ARL17AQ8IVW1 177 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 H3BMG7 143 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 Q6ZSA8 131 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
TRAF3IP2-211ENST00000528599 PRO0461Q9UI25 63 aa7.72□□□□□ -1.17
TRAF3IP2-211ENST00000528599 DNAH8Q96JB1 4490 aa7.71□□□□□ -1.17
TRAF3IP2-211ENST00000528599 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.18
TRAF3IP2-211ENST00000528599 SOSTDC1Q6X4U4 206 aa7.71□□□□□ -1.18
TRAF3IP2-211ENST00000528599 FAM168BA1KXE4 195 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 SCGB1C2P0DMR2 95 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 LINC00474Q9P2X8 69 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 TCL1BO95988 128 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 PSMB2P49721 201 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 NPC2P61916 151 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 DPH3Q96FX2 82 aa7.7□□□□□ -1.18
TRAF3IP2-211ENST00000528599 A0A087WYN8 130 aa7.69□□□□□ -1.18
TRAF3IP2-211ENST00000528599 K7ERU9 68 aa7.69□□□□□ -1.18
TRAF3IP2-211ENST00000528599 COX6CP09669 75 aa7.69□□□□□ -1.18
TRAF3IP2-211ENST00000528599 HAMPP81172 84 aa7.69□□□□□ -1.18
TRAF3IP2-211ENST00000528599 Q8NDZ9 215 aa7.69□□□□□ -1.18
TRAF3IP2-211ENST00000528599 M0QXV9 152 aa7.68□□□□□ -1.18
TRAF3IP2-211ENST00000528599 Q1RN00 199 aa7.68□□□□□ -1.18
TRAF3IP2-211ENST00000528599 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
TRAF3IP2-211ENST00000528599 LINC01600Q96MT4 127 aa7.68□□□□□ -1.18
TRAF3IP2-211ENST00000528599 TRIAP1O43715 76 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 FAT1Q14517 4588 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 H7C2G1 150 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 PLAC8Q9NZF1 115 aa7.67□□□□□ -1.18
TRAF3IP2-211ENST00000528599 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
TRAF3IP2-211ENST00000528599 VPREB1P12018 145 aa7.66□□□□□ -1.18
TRAF3IP2-211ENST00000528599 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
TRAF3IP2-211ENST00000528599 XGP55808 180 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms