RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 CHAC1Q9BUX1 264 aa7.25□□□□□ -1.25
SNRNP35-203ENST00000526639 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 Q5VSD8 79 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 TRAV8-4A0A0B4J246 113 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 FAM19A3Q7Z5A8 133 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
SNRNP35-203ENST00000526639 EIF4EBP3O60516 100 aaPredicted RBP7.23□□□□□ -1.25
SNRNP35-203ENST00000526639 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
SNRNP35-203ENST00000526639 CD164Q04900 197 aa7.23□□□□□ -1.25
SNRNP35-203ENST00000526639 Q6ZSA8 131 aa7.23□□□□□ -1.25
SNRNP35-203ENST00000526639 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
SNRNP35-203ENST00000526639 LINC00242Q5T6M2 205 aa7.22□□□□□ -1.25
SNRNP35-203ENST00000526639 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
SNRNP35-203ENST00000526639 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
SNRNP35-203ENST00000526639 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
SNRNP35-203ENST00000526639 NDUFV3P56181 108 aaKnown RBP7.21□□□□□ -1.26
SNRNP35-203ENST00000526639 HERVK_113P63121 156 aa7.21□□□□□ -1.26
SNRNP35-203ENST00000526639 COX6A2Q02221 97 aa7.21□□□□□ -1.26
SNRNP35-203ENST00000526639 LINC01561Q8N1V8 128 aa7.21□□□□□ -1.26
SNRNP35-203ENST00000526639 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 SCXQ7RTU7 201 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 APOMO95445 188 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
SNRNP35-203ENST00000526639 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 H3BMG7 143 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 HERVK_113P61574 105 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 SS18Q15532 418 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 Q6Q795 121 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 CIRBP-AS1Q8TBR5 109 aa7.19□□□□□ -1.26
SNRNP35-203ENST00000526639 VPS13BQ7Z7G8 4022 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 A0A1B0GWB2 263 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 SLPIP03973 132 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 XCL1P47992 114 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 NMUP48645 174 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 FXYD2P54710 66 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
SNRNP35-203ENST00000526639 IGHV3OR16-9A0A0B4J2B5 98 aa7.17□□□□□ -1.26
SNRNP35-203ENST00000526639 C15orf56Q8N910 161 aa7.17□□□□□ -1.26
SNRNP35-203ENST00000526639 HIGD2BQ4VC39 106 aa7.17□□□□□ -1.26
SNRNP35-203ENST00000526639 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
SNRNP35-203ENST00000526639 MYCBP2O75592 4640 aa7.16□□□□□ -1.26
SNRNP35-203ENST00000526639 IGHV3-64A0A075B6Q5 118 aa7.16□□□□□ -1.26
SNRNP35-203ENST00000526639 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
SNRNP35-203ENST00000526639 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
SNRNP35-203ENST00000526639 TTTY13Q9BZ97 58 aa7.16□□□□□ -1.26
SNRNP35-203ENST00000526639 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 SMIM1B2RUZ4 78 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 PANO1I0J062 215 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 LEPROTO15243 131 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 CNBPP62633 177 aaKnown RBP7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 SDIM1Q6ZPB5 146 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 PPDPFLQ8WWR9 84 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 CARD19Q96LW7 228 aa7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.26
SNRNP35-203ENST00000526639 IFITM1P13164 125 aa7.15□□□□□ -1.27
SNRNP35-203ENST00000526639 TSPEAR-AS2P59090 65 aa7.15□□□□□ -1.27
SNRNP35-203ENST00000526639 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.27
SNRNP35-203ENST00000526639 C5orf38Q86SI9 138 aa7.15□□□□□ -1.27
SNRNP35-203ENST00000526639 A0A087WZ39 114 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 IGLV5-39A0A0G2JS06 123 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 A0A1B0GX51 115 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 J3QQQ9 107 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
SNRNP35-203ENST00000526639 K7ERJ3 54 aa7.13□□□□□ -1.27
SNRNP35-203ENST00000526639 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
SNRNP35-203ENST00000526639 LINC00526Q96FQ7 95 aa7.13□□□□□ -1.27
SNRNP35-203ENST00000526639 TRBV20-1A0A075B6N2 111 aa7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 COX7A2LO14548 114 aa7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 PLA2G1BP04054 148 aaKnown RBP7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 CHTF8P0CG12 524 aa7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 CEND1Q8N111 149 aa7.12□□□□□ -1.27
SNRNP35-203ENST00000526639 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 DPH3Q96FX2 82 aa7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 J3KT08 172 aa7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 TEN1Q86WV5 123 aa7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
SNRNP35-203ENST00000526639 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
SNRNP35-203ENST00000526639 NDUFA12Q9UI09 145 aa7.09□□□□□ -1.27
SNRNP35-203ENST00000526639 PRYO14603 147 aa7.09□□□□□ -1.27
SNRNP35-203ENST00000526639 COX7B2Q8TF08 81 aa7.09□□□□□ -1.27
SNRNP35-203ENST00000526639 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms