RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 Q8N9W7 124 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
C11orf54-203ENST00000526335 LRRK2Q5S007 2527 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 USP9YO00507 2555 aaPredicted RBP3.49□□□□□ -1.85
C11orf54-203ENST00000526335 LAMA5O15230 3695 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV3-49A0A0A0MS15 119 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV3-74A0A0B4J1X5 117 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 IBA57-AS1B1ANH7 110 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 E7EQL1 145 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 RTL8CO15255 209 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 LYPD5Q6UWN5 251 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 FREM2Q5SZK8 3169 aa3.49□□□□□ -1.85
C11orf54-203ENST00000526335 ABCA2Q9BZC7 2435 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 TRAV7A0A075B6U4 112 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 IGHV1OR15-1A0A075B7D0 117 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 A0A1W2PPR1 153 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 CRPP02741 224 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 XCL1P47992 114 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 RBM3P98179 157 aaKnown RBP3.48□□□□□ -1.85
C11orf54-203ENST00000526335 FAM74A4Q5TZK3 123 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 RMI2Q96E14 147 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 SVILO95425 2214 aa3.48□□□□□ -1.85
C11orf54-203ENST00000526335 NBASA2RRP1 2371 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 F8P00451 2351 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 A0A087WVE0 104 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 JMJD7-PLA2G4BH0Y9G9 81 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 H3BUA1 57 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 SOSTDC1Q6X4U4 206 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 INTS1Q8N201 2190 aaKnown RBP3.47□□□□□ -1.85
C11orf54-203ENST00000526335 DEFB104AQ8WTQ1 72 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
C11orf54-203ENST00000526335 FBN2P35556 2912 aa3.46□□□□□ -1.85
C11orf54-203ENST00000526335 CELSR3Q9NYQ7 3312 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 CNTRLQ7Z7A1 2325 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 DNAJC13O75165 2243 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 H7BZZ5 65 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 C19orf84I3L1E1 186 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 KLKP1Q107X0 134 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 Q1T7F1 81 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 IGFL3Q6UXB1 125 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 USMG5Q96IX5 58 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 C14orf132Q9NPU4 83 aa3.46□□□□□ -1.86
C11orf54-203ENST00000526335 SETD2Q9BYW2 2564 aaPredicted RBP3.46□□□□□ -1.86
C11orf54-203ENST00000526335 REG3AQ06141 175 aa3.45□□□□□ -1.86
C11orf54-203ENST00000526335 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
C11orf54-203ENST00000526335 LINC00167Q96N53 147 aa3.45□□□□□ -1.86
C11orf54-203ENST00000526335 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
C11orf54-203ENST00000526335 MED13Q9UHV7 2174 aa3.45□□□□□ -1.86
C11orf54-203ENST00000526335 PLXNB1O43157 2135 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 SPG11Q96JI7 2443 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 NACAE9PAV3 2078 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 MALRD1Q5VYJ5 2156 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 TRAV23DV6A0A075B6W5 121 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 LYNX1G3V0Z9 82 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 G3V318 75 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 LYNX1P0DP58 116 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 DEFB1P60022 68 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 ASB16-AS1Q495Z4 193 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 RHPN1-AS1Q9BWJ2 59 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 UBL5Q9BZL1 73 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 LINC00474Q9P2X8 69 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 MGAQ8IWI9 3026 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 ARFGEF3Q5TH69 2177 aa3.44□□□□□ -1.86
C11orf54-203ENST00000526335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
C11orf54-203ENST00000526335 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
C11orf54-203ENST00000526335 A6NN06 94 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 NCR3O14931 201 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
C11orf54-203ENST00000526335 C5orf56Q8N8D9 126 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 LINC00467Q9BRT7 94 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 SND1-IT1Q9HBX3 110 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 LAMA1P25391 3075 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 MED13LQ71F56 2210 aa3.43□□□□□ -1.86
C11orf54-203ENST00000526335 ITPR2Q14571 2701 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 LECT2O14960 151 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 LY6G6DO95868 133 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 COX6A2Q02221 97 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 ESRGQ1W209 222 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 DEFB109BQ30KR1 87 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
C11orf54-203ENST00000526335 ENHOQ6UWT2 76 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
C11orf54-203ENST00000526335 RP1L1Q8IWN7 2480 aaPredicted RBP3.42□□□□□ -1.86
C11orf54-203ENST00000526335 TLN1Q9Y490 2541 aaKnown RBP3.42□□□□□ -1.86
C11orf54-203ENST00000526335 MUC4Q99102 2169 aa3.41□□□□□ -1.86
C11orf54-203ENST00000526335 IGLV8-61A0A075B6I0 122 aa3.41□□□□□ -1.86
C11orf54-203ENST00000526335 ERC2-IT1O76042 136 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms