RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
COLCA2-202ENST00000526216 BVES-AS1Q5T3Y7 98 aa9.28□□□□□ -0.92
COLCA2-202ENST00000526216 Q8NDZ9 215 aa9.28□□□□□ -0.92
COLCA2-202ENST00000526216 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 GCSHP23434 173 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 Q6ZVH6 145 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 C9orf163Q8N9P6 203 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
COLCA2-202ENST00000526216 EREGO14944 169 aa9.26□□□□□ -0.93
COLCA2-202ENST00000526216 IFITM1P13164 125 aa9.26□□□□□ -0.93
COLCA2-202ENST00000526216 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
COLCA2-202ENST00000526216 KRTAP4-8A0A0G2JLE6 195 aa9.25□□□□□ -0.93
COLCA2-202ENST00000526216 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
COLCA2-202ENST00000526216 SNHG12Q9BXW3 62 aa9.25□□□□□ -0.93
COLCA2-202ENST00000526216 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
COLCA2-202ENST00000526216 DYNC1H1Q14204 4646 aaKnown RBP9.24□□□□□ -0.93
COLCA2-202ENST00000526216 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
COLCA2-202ENST00000526216 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
COLCA2-202ENST00000526216 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 KRTAP4-12Q9BQ66 201 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
COLCA2-202ENST00000526216 A4D1N5 150 aa9.23□□□□□ -0.93
COLCA2-202ENST00000526216 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
COLCA2-202ENST00000526216 A0A096LNI7 61 aa9.22□□□□□ -0.93
COLCA2-202ENST00000526216 SDIM1Q6ZPB5 146 aa9.22□□□□□ -0.93
COLCA2-202ENST00000526216 M0R143 59 aa9.21□□□□□ -0.94
COLCA2-202ENST00000526216 GAGE2BQ13066 116 aa9.21□□□□□ -0.94
COLCA2-202ENST00000526216 BATFQ16520 125 aa9.21□□□□□ -0.94
COLCA2-202ENST00000526216 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
COLCA2-202ENST00000526216 PANO1I0J062 215 aa9.2□□□□□ -0.94
COLCA2-202ENST00000526216 RPL24P83731 157 aaKnown RBP9.2□□□□□ -0.94
COLCA2-202ENST00000526216 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
COLCA2-202ENST00000526216 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 K7ERJ3 54 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 CFC1P0CG37 223 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 LINC00336Q6ZUF6 198 aa9.19□□□□□ -0.94
COLCA2-202ENST00000526216 NHP2Q9NX24 153 aaKnown RBP9.19□□□□□ -0.94
COLCA2-202ENST00000526216 A0A1B0GVY2 172 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 A0A1B0GWB2 263 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 VPREB1P12018 145 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 PRR3P79522 188 aaKnown RBP9.18□□□□□ -0.94
COLCA2-202ENST00000526216 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
COLCA2-202ENST00000526216 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
COLCA2-202ENST00000526216 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
COLCA2-202ENST00000526216 NDUFC2O95298 119 aa9.16□□□□□ -0.94
COLCA2-202ENST00000526216 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
COLCA2-202ENST00000526216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
COLCA2-202ENST00000526216 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
COLCA2-202ENST00000526216 A6NJY4 79 aa9.15□□□□□ -0.94
COLCA2-202ENST00000526216 NCR3O14931 201 aa9.15□□□□□ -0.94
COLCA2-202ENST00000526216 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.94
COLCA2-202ENST00000526216 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.94
COLCA2-202ENST00000526216 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
COLCA2-202ENST00000526216 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
COLCA2-202ENST00000526216 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
COLCA2-202ENST00000526216 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
COLCA2-202ENST00000526216 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
COLCA2-202ENST00000526216 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
COLCA2-202ENST00000526216 A6NDN8 102 aa9.12□□□□□ -0.95
COLCA2-202ENST00000526216 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
COLCA2-202ENST00000526216 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
COLCA2-202ENST00000526216 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
COLCA2-202ENST00000526216 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
COLCA2-202ENST00000526216 RPL13AP40429 203 aaKnown RBP9.1□□□□□ -0.95
COLCA2-202ENST00000526216 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
COLCA2-202ENST00000526216 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
COLCA2-202ENST00000526216 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
COLCA2-202ENST00000526216 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
COLCA2-202ENST00000526216 PRO1854Q9UHT4 67 aa9.09□□□□□ -0.95
COLCA2-202ENST00000526216 EPM2AB3EWF7 344 aa9.08□□□□□ -0.96
COLCA2-202ENST00000526216 COL5A1-AS1Q5SY13 56 aa9.08□□□□□ -0.96
COLCA2-202ENST00000526216 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
COLCA2-202ENST00000526216 C22orf24Q9Y442 160 aa9.08□□□□□ -0.96
COLCA2-202ENST00000526216 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
COLCA2-202ENST00000526216 M0R378 163 aa9.07□□□□□ -0.96
COLCA2-202ENST00000526216 TSPAN13O95857 204 aa9.07□□□□□ -0.96
COLCA2-202ENST00000526216 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
COLCA2-202ENST00000526216 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
COLCA2-202ENST00000526216 IGLV6-57P01721 117 aa9.06□□□□□ -0.96
COLCA2-202ENST00000526216 Q6ZSA8 131 aa9.06□□□□□ -0.96
COLCA2-202ENST00000526216 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
COLCA2-202ENST00000526216 A0A087WYN8 130 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 H7C2G1 150 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 M0QXV9 152 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 PHF5AQ7RTV0 110 aaKnown RBP9.05□□□□□ -0.96
COLCA2-202ENST00000526216 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 LINC00167Q96N53 147 aa9.05□□□□□ -0.96
COLCA2-202ENST00000526216 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
COLCA2-202ENST00000526216 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms