RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TTC28Q96AY4 2481 aa1.12□□□□□ -2.23
USP47-206ENST00000525367 ANKRD36A6QL64 1941 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 KIF20BQ96Q89 1820 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 HMGA1P17096 107 aaKnown RBP1.11□□□□□ -2.23
USP47-206ENST00000525367 NREPQ16612 68 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 CLIP1P30622 1438 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 RGPD8O14715 1765 aaPredicted RBP1.11□□□□□ -2.23
USP47-206ENST00000525367 RGPD5Q99666 1765 aa1.11□□□□□ -2.23
USP47-206ENST00000525367 MEGF8Q7Z7M0 2845 aa1.1□□□□□ -2.23
USP47-206ENST00000525367 H3BVH4 76 aa1.1□□□□□ -2.23
USP47-206ENST00000525367 CCL22O00626 93 aa1.1□□□□□ -2.23
USP47-206ENST00000525367 HEPN1Q6WQI6 88 aa1.1□□□□□ -2.23
USP47-206ENST00000525367 MRPL34Q9BQ48 92 aaKnown RBP1.1□□□□□ -2.23
USP47-206ENST00000525367 MAGI3Q5TCQ9 1506 aa1.1□□□□□ -2.23
USP47-206ENST00000525367 RGPD1P0DJD0 1748 aa1.09□□□□□ -2.23
USP47-206ENST00000525367 CEP170BQ9Y4F5 1589 aaPredicted RBP1.09□□□□□ -2.23
USP47-206ENST00000525367 RGPD2P0DJD1 1756 aa1.09□□□□□ -2.23
USP47-206ENST00000525367 USP32Q8NFA0 1604 aa1.09□□□□□ -2.23
USP47-206ENST00000525367 SMIM31A0A1B0GVY4 71 aa1.09□□□□□ -2.23
USP47-206ENST00000525367 SPRR1BP22528 89 aa1.09□□□□□ -2.23
USP47-206ENST00000525367 UBR3Q6ZT12 1888 aa1.09□□□□□ -2.24
USP47-206ENST00000525367 SPRR1AP35321 89 aa1.08□□□□□ -2.24
USP47-206ENST00000525367 Q5BKY6 102 aa1.08□□□□□ -2.24
USP47-206ENST00000525367 LRRIQ1Q96JM4 1722 aa1.08□□□□□ -2.24
USP47-206ENST00000525367 SPTBN2O15020 2390 aa1.06□□□□□ -2.24
USP47-206ENST00000525367 URB1O60287 2271 aaKnown RBP1.06□□□□□ -2.24
USP47-206ENST00000525367 PPRC1Q5VV67 1664 aaKnown RBP1.06□□□□□ -2.24
USP47-206ENST00000525367 ANKRD50Q9ULJ7 1429 aa1.06□□□□□ -2.24
USP47-206ENST00000525367 PLCE1Q9P212 2302 aa1.05□□□□□ -2.24
USP47-206ENST00000525367 LCE6AA0A183 80 aa1.05□□□□□ -2.24
USP47-206ENST00000525367 FXYD6Q9H0Q3 95 aa1.05□□□□□ -2.24
USP47-206ENST00000525367 LTN1O94822 1766 aa1.05□□□□□ -2.24
USP47-206ENST00000525367 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
USP47-206ENST00000525367 DNMBPQ6XZF7 1577 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 MYO5CQ9NQX4 1742 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 SPINK4O60575 86 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 DEFB105AQ8NG35 78 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 APLNQ9ULZ1 77 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 CD163L1Q9NR16 1453 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 IQGAP3Q86VI3 1631 aa1.04□□□□□ -2.24
USP47-206ENST00000525367 QSER1Q2KHR3 1735 aa1.03□□□□□ -2.24
USP47-206ENST00000525367 SPINK1P00995 79 aa1.03□□□□□ -2.24
USP47-206ENST00000525367 DEFB109BQ30KR1 87 aa1.03□□□□□ -2.24
USP47-206ENST00000525367 SCN11AQ9UI33 1791 aa1.03□□□□□ -2.24
USP47-206ENST00000525367 NDUFA4O00483 81 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 PRH1P02810 166 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 ATXN8Q156A1 80 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 GNG13Q9P2W3 67 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 DOPEY2Q9Y3R5 2298 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 ABCA12Q86UK0 2595 aa1.02□□□□□ -2.25
USP47-206ENST00000525367 CACNA1EQ15878 2313 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 USF3Q68DE3 2245 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 FMN2Q9NZ56 1722 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 ZNF831Q5JPB2 1677 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 POLQO75417 2590 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 COX6B2Q6YFQ2 88 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 HILPDAQ9Y5L2 63 aa1.01□□□□□ -2.25
USP47-206ENST00000525367 COL14A1Q05707 1796 aaKnown RBP1.01□□□□□ -2.25
USP47-206ENST00000525367 BDP1A6H8Y1 2624 aa1□□□□□ -2.25
USP47-206ENST00000525367 CDKN2A-AS1Q9UH64 79 aa1□□□□□ -2.25
USP47-206ENST00000525367 POLR1AO95602 1720 aaPredicted RBP1□□□□□ -2.25
USP47-206ENST00000525367 F8P00451 2351 aa0.99□□□□□ -2.25
USP47-206ENST00000525367 LMTK2Q8IWU2 1503 aa0.99□□□□□ -2.25
USP47-206ENST00000525367 ARFGEF2Q9Y6D5 1785 aa0.98□□□□□ -2.25
USP47-206ENST00000525367 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
USP47-206ENST00000525367 SMR3AQ99954 134 aa0.98□□□□□ -2.25
USP47-206ENST00000525367 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
USP47-206ENST00000525367 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
USP47-206ENST00000525367 ADAMTS12P58397 1594 aa0.97□□□□□ -2.25
USP47-206ENST00000525367 PTPRQQ9UMZ3 2332 aa0.97□□□□□ -2.25
USP47-206ENST00000525367 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
USP47-206ENST00000525367 FBN2P35556 2912 aa0.96□□□□□ -2.26
USP47-206ENST00000525367 ERICH3Q5RHP9 1530 aa0.96□□□□□ -2.26
USP47-206ENST00000525367 KLK9Q2XQG4 91 aa0.96□□□□□ -2.26
USP47-206ENST00000525367 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
USP47-206ENST00000525367 NWD1Q149M9 1564 aa0.96□□□□□ -2.26
USP47-206ENST00000525367 PTPRZ1P23471 2315 aaPredicted RBP0.95□□□□□ -2.26
USP47-206ENST00000525367 DOT1LQ8TEK3 1739 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 ASXL1Q8IXJ9 1541 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 PREX1Q8TCU6 1659 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 PIEZO2Q9H5I5 2752 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 TPRP12270 2363 aaKnown RBP0.95□□□□□ -2.26
USP47-206ENST00000525367 A0A087WWC5 75 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 BCORQ6W2J9 1755 aa0.95□□□□□ -2.26
USP47-206ENST00000525367 EFCAB5A4FU69 1503 aa0.94□□□□□ -2.26
USP47-206ENST00000525367 ZC3H13Q5T200 1668 aaKnown RBP0.94□□□□□ -2.26
USP47-206ENST00000525367 CFAP43Q8NDM7 1665 aa0.94□□□□□ -2.26
USP47-206ENST00000525367 ENHOQ6UWT2 76 aa0.94□□□□□ -2.26
USP47-206ENST00000525367 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
USP47-206ENST00000525367 RALGAPBQ86X10 1494 aa0.93□□□□□ -2.26
USP47-206ENST00000525367 TSC2P49815 1807 aa0.93□□□□□ -2.26
USP47-206ENST00000525367 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
USP47-206ENST00000525367 APCP25054 2843 aa0.93□□□□□ -2.26
USP47-206ENST00000525367 CDC42BPGQ6DT37 1551 aa0.92□□□□□ -2.26
USP47-206ENST00000525367 HFM1A2PYH4 1435 aa0.92□□□□□ -2.26
USP47-206ENST00000525367 NDUFA3O95167 84 aa0.92□□□□□ -2.26
USP47-206ENST00000525367 S100ZQ8WXG8 99 aa0.92□□□□□ -2.26
USP47-206ENST00000525367 UBL5Q9BZL1 73 aa0.92□□□□□ -2.26
USP47-206ENST00000525367 U3KQA8 63 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms