RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 ABRACLQ9P1F3 81 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 PRO1854Q9UHT4 67 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 UBE2D4Q9Y2X8 147 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 ERCC6L2Q5T890 1561 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 KDM6BO15054 1643 aa0.82□□□□□ -2.28
CPNE3-207ENST00000523588 CXorf51AA0A1B0GTR3 108 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 LINC01549A6NIU2 74 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ZNF815PA8K554 130 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 CHKB-CPT1BH3BT56 60 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 EDDM3BP56851 147 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ATXN8Q156A1 80 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ZNF818PQ6ZRF7 136 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 DMAC1Q96GE9 116 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 CDC42SE2Q9NRR3 84 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 TMEM14BQ9NUH8 114 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ABCA4P78363 2273 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ZNF831Q5JPB2 1677 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 NHSQ6T4R5 1651 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 RICTORQ6R327 1708 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 TIAM2Q8IVF5 1701 aa0.81□□□□□ -2.28
CPNE3-207ENST00000523588 ZNF462Q96JM2 2506 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 SLIT1O75093 1534 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 SAMD9LQ8IVG5 1584 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 DEPDC5O75140 1603 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 LRP6O75581 1613 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 NRXN3Q9Y4C0 1643 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 A0A087WVE0 104 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 TRAV12-3A0A0B4J271 114 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 NBDYA0A0U1RRE5 68 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 LOC101927531A0A1B0GV80 90 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 HIGD1CA8MV81 97 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 K7EMI3 77 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 COX6CP09669 75 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 HMGA1P17096 107 aaKnown RBP0.8□□□□□ -2.28
CPNE3-207ENST00000523588 SNRPGP62308 76 aaKnown RBP0.8□□□□□ -2.28
CPNE3-207ENST00000523588 FXYD3Q14802 87 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 C10orf128Q5T292 105 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 ATP5EP2Q5VTU8 51 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 NDUFA4L2Q9NRX3 87 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 DDX60LQ5H9U9 1706 aaKnown RBP0.8□□□□□ -2.28
CPNE3-207ENST00000523588 BCORQ6W2J9 1755 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
CPNE3-207ENST00000523588 GOLGA4Q13439 2230 aaKnown RBP0.8□□□□□ -2.28
CPNE3-207ENST00000523588 NHSL1Q5SYE7 1610 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 SCN7AQ01118 1682 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 SHPRHQ149N8 1683 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 DOT1LQ8TEK3 1739 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 TRAV1-2A0A0B4J238 106 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 TRBV7-4A0A0J9YYF1 115 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 CLPSL1A2RUU4 121 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 HMGN4O00479 90 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 IFI6P09912 130 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 ARMS2P0C7Q2 107 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 FCER1GP30273 86 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 FDCSPQ8NFU4 85 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 V9GYV3 84 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 SPAG17Q6Q759 2223 aa0.79□□□□□ -2.28
CPNE3-207ENST00000523588 DDX60Q8IY21 1712 aaKnown RBP0.78□□□□□ -2.28
CPNE3-207ENST00000523588 TOGARAM1Q9Y4F4 1720 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 D6R8Y8 96 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 SAA2P0DJI9 122 aaPredicted RBP0.78□□□□□ -2.28
CPNE3-207ENST00000523588 SPINK13Q1W4C9 94 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 MUSTN1Q8IVN3 82 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 TMEM263Q8WUH6 116 aaKnown RBP0.78□□□□□ -2.28
CPNE3-207ENST00000523588 LINC00208Q96KT6 92 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 PLAC8Q9NZF1 115 aa0.78□□□□□ -2.28
CPNE3-207ENST00000523588 DUOX1Q9NRD9 1551 aa0.78□□□□□ -2.29
CPNE3-207ENST00000523588 NRAPQ86VF7 1730 aa0.78□□□□□ -2.29
CPNE3-207ENST00000523588 ZFHX3Q15911 3703 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 TRBV10-1A0A0K0K1A3 114 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 CTXND1A0A1B0GTU2 59 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 ELOF1P60002 83 aaKnown RBP0.77□□□□□ -2.29
CPNE3-207ENST00000523588 SERF2P84101 59 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 SPAG11BQ08648 103 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 SPAG11AQ6PDA7 123 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 LINC00846Q9NV44 126 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 LENEPQ9Y5L5 61 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 NRXN2Q9P2S2 1712 aa0.77□□□□□ -2.29
CPNE3-207ENST00000523588 TTC28Q96AY4 2481 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 TNCP24821 2201 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 M0R135 149 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 M0R3E3 92 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 SPINK4O60575 86 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 PPP1R17O96001 155 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 NREPQ16612 68 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 FAM74A4Q5TZK3 123 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 ENHOQ6UWT2 76 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 WFDC6Q9BQY6 131 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 MED13LQ71F56 2210 aa0.76□□□□□ -2.29
CPNE3-207ENST00000523588 PLXNB2O15031 1838 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 ASH1LQ9NR48 2969 aaKnown RBP0.75□□□□□ -2.29
CPNE3-207ENST00000523588 A0A0G2JMZ2 1700 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LRRC37A2A6NM11 1700 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 LRRC37AA6NMS7 1700 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 C4AP0C0L4 1744 aa0.75□□□□□ -2.29
CPNE3-207ENST00000523588 KNTC1P50748 2209 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms