RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FLNAP21333 2647 aaKnown RBP5.77□□□□□ -1.49
CSMD1-213ENST00000523488 TRGV4A0A0C4DH28 118 aa5.76□□□□□ -1.49
CSMD1-213ENST00000523488 M0R2N4 97 aa5.76□□□□□ -1.49
CSMD1-213ENST00000523488 Q6ZQY7 126 aa5.76□□□□□ -1.49
CSMD1-213ENST00000523488 STHQ8IWL8 128 aa5.76□□□□□ -1.49
CSMD1-213ENST00000523488 ATRQ13535 2644 aa5.76□□□□□ -1.49
CSMD1-213ENST00000523488 MRPL55Q7Z7F7 128 aaKnown RBP5.76□□□□□ -1.49
CSMD1-213ENST00000523488 ITPR3Q14573 2671 aa5.75□□□□□ -1.49
CSMD1-213ENST00000523488 PSPHP1O15172 72 aa5.75□□□□□ -1.49
CSMD1-213ENST00000523488 C10orf99Q6UWK7 81 aa5.75□□□□□ -1.49
CSMD1-213ENST00000523488 LINC00575Q6W349 94 aa5.75□□□□□ -1.49
CSMD1-213ENST00000523488 CRYBG3Q68DQ2 2970 aa5.75□□□□□ -1.49
CSMD1-213ENST00000523488 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 DEFB112Q30KQ8 113 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 NOP10Q9NPE3 64 aaKnown RBP5.74□□□□□ -1.49
CSMD1-213ENST00000523488 ITPR1Q14643 2758 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 IGHV4-30-4P0DP06 118 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 Q8IZM0 81 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 HIGD2AQ9BW72 106 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 IGSF10Q6WRI0 2623 aa5.74□□□□□ -1.49
CSMD1-213ENST00000523488 CHD6Q8TD26 2715 aa5.73□□□□□ -1.49
CSMD1-213ENST00000523488 Q8N9L7 120 aa5.73□□□□□ -1.49
CSMD1-213ENST00000523488 SPATA3Q8NHX4 192 aa5.73□□□□□ -1.49
CSMD1-213ENST00000523488 A0A1B0GW54 56 aa5.73□□□□□ -1.49
CSMD1-213ENST00000523488 PRB2P02812 416 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-213ENST00000523488 BBC3Q96PG8 261 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-213ENST00000523488 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 CD164Q04900 197 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 MAST4O15021 2626 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 LINC00959A0A1B0GUT2 108 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 SLURP1P55000 103 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 MAP6D1Q9H9H5 199 aa5.72□□□□□ -1.49
CSMD1-213ENST00000523488 CELSR1Q9NYQ6 3014 aa5.71□□□□□ -1.49
CSMD1-213ENST00000523488 F8P00451 2351 aa5.71□□□□□ -1.49
CSMD1-213ENST00000523488 LINC00612Q8N6U2 182 aa5.71□□□□□ -1.49
CSMD1-213ENST00000523488 hDV103S1A0JD37 113 aa5.71□□□□□ -1.5
CSMD1-213ENST00000523488 MGAM2Q2M2H8 2515 aa5.7□□□□□ -1.5
CSMD1-213ENST00000523488 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
CSMD1-213ENST00000523488 LINC01356Q8N9X3 169 aa5.7□□□□□ -1.5
CSMD1-213ENST00000523488 ZANQ9Y493 2812 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 PRR4Q16378 134 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-213ENST00000523488 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 FAM30AQ9NZY2 134 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 UTP20O75691 2785 aaKnown RBP5.69□□□□□ -1.5
CSMD1-213ENST00000523488 FSHBP01225 129 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CSMD1-213ENST00000523488 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 Q8NDZ9 215 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 SPTSSBQ8NFR3 76 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-213ENST00000523488 HTN3P15516 51 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 HIGD2BQ4VC39 106 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 CD164L2Q6UWJ8 174 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 LINC01006Q8NI28 216 aa5.68□□□□□ -1.5
CSMD1-213ENST00000523488 COX7BP24311 80 aa5.67□□□□□ -1.5
CSMD1-213ENST00000523488 CSNK1G2-AS1Q8NCQ2 148 aa5.67□□□□□ -1.5
CSMD1-213ENST00000523488 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
CSMD1-213ENST00000523488 GCN1Q92616 2671 aaKnown RBP5.66□□□□□ -1.5
CSMD1-213ENST00000523488 C3orf84H3BNL1 204 aa5.66□□□□□ -1.5
CSMD1-213ENST00000523488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-213ENST00000523488 TEX15Q9BXT5 2789 aa5.66□□□□□ -1.5
CSMD1-213ENST00000523488 TRAV22A0A0B4J277 110 aa5.65□□□□□ -1.51
CSMD1-213ENST00000523488 CCL24O00175 119 aa5.65□□□□□ -1.51
CSMD1-213ENST00000523488 UBE2BP63146 152 aa5.65□□□□□ -1.51
CSMD1-213ENST00000523488 Q6ZRP5 223 aa5.65□□□□□ -1.51
CSMD1-213ENST00000523488 A0A096LPF7 62 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 A0A0J9YWU9 116 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 DEFB130BP0DP73 79 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 DEFB130AP0DP74 79 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 LYRM9A8MSI8 78 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 A8MUN3 132 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 CHKB-CPT1BH3BT56 60 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 CUBNO60494 3623 aa5.64□□□□□ -1.51
CSMD1-213ENST00000523488 ANGP03950 147 aaKnown RBP5.63□□□□□ -1.51
CSMD1-213ENST00000523488 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-213ENST00000523488 SMIM29Q86T20 159 aa5.63□□□□□ -1.51
CSMD1-213ENST00000523488 C16orf74Q96GX8 76 aa5.63□□□□□ -1.51
CSMD1-213ENST00000523488 C18orf65Q6ZTR6 163 aa5.63□□□□□ -1.51
CSMD1-213ENST00000523488 GYPEP15421 78 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 DSCR9P59020 149 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-213ENST00000523488 UBR5O95071 2799 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-213ENST00000523488 ALMS1Q8TCU4 4167 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 DEFB113Q30KQ7 82 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 J3QKU1 62 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-213ENST00000523488 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 KLK12Q9UKR0 248 aa5.62□□□□□ -1.51
CSMD1-213ENST00000523488 UBE2AP49459 152 aa5.61□□□□□ -1.51
CSMD1-213ENST00000523488 ODF3L2Q3SX64 289 aa5.61□□□□□ -1.51
CSMD1-213ENST00000523488 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
CSMD1-213ENST00000523488 DEFB105AQ8NG35 78 aa5.61□□□□□ -1.51
CSMD1-213ENST00000523488 XAGE1AQ9HD64 81 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms