RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 SETD2Q9BYW2 2564 aaPredicted RBP2.32□□□□□ -2.04
SKP1-211ENST00000523359 RTTNQ86VV8 2226 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 A0A087WTM6 91 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 LINC01549A6NIU2 74 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 CPSF4LA6NMK7 179 aaKnown RBP2.32□□□□□ -2.04
SKP1-211ENST00000523359 IL9P15248 144 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 PLNP26678 52 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 ATP5EP2Q5VTU8 51 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 COX7B2Q8TF08 81 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 PROK2Q9HC23 129 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 SSC5DA1L4H1 1573 aa2.32□□□□□ -2.04
SKP1-211ENST00000523359 ZDBF2Q9HCK1 2354 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 ZFHX4Q86UP3 3567 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 PPP1R17O96001 155 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 ARMS2P0C7Q2 107 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 SPAG11BQ08648 103 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 TTTY12Q9BZ98 90 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 EYSQ5T1H1 3165 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 BRCA2P51587 3418 aa2.31□□□□□ -2.04
SKP1-211ENST00000523359 INE1O15225 51 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 FCER1GP30273 86 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 LINC01590Q5TEZ4 76 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 WFDC6Q9BQY6 131 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 LINC01558Q9Y6Z2 57 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 R4GMQ9 66 aa2.3□□□□□ -2.04
SKP1-211ENST00000523359 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 PRUNE2Q8WUY3 3088 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 GCN1Q92616 2671 aaKnown RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 ALPK2Q86TB3 2170 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 MDC1Q14676 2089 aaKnown RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 M0R2N4 97 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 DEFB106AQ8N104 65 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 ARHGAP5-AS1Q96IT6 56 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 PRO3102Q9H379 93 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 LAMA3Q16787 3333 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 FN1P02751 2386 aaKnown RBP2.29□□□□□ -2.04
SKP1-211ENST00000523359 MYO7AQ13402 2215 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 MUC3AQ02505 3323 aa2.29□□□□□ -2.04
SKP1-211ENST00000523359 HIVEP2P31629 2446 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 TRBV7-4A0A0J9YYF1 115 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 H3BRN7 92 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 K7EMI3 77 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 SPINK4O60575 86 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 ARL14EPLP0DKL9 152 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 RPL37AP61513 92 aaKnown RBP2.28□□□□□ -2.04
SKP1-211ENST00000523359 GDF5OSQ5U4N7 250 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 KLK9Q9UKQ9 250 aa2.28□□□□□ -2.04
SKP1-211ENST00000523359 NAV3Q8IVL0 2385 aa2.28□□□□□ -2.05
SKP1-211ENST00000523359 DOCK10Q96BY6 2186 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 TRBV6-5A0A0K0K1A5 114 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 A0A1B0GUT8 65 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 F8VRH5 84 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 FXYD3Q14802 87 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 LINC00846Q9NV44 126 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 CFAP47Q6ZTR5 3102 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 ZNF831Q5JPB2 1677 aa2.27□□□□□ -2.05
SKP1-211ENST00000523359 CENPFP49454 3210 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 TRBV6-1A0A0K0K1D8 114 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 FXYD4P59646 89 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 C5orf56Q8N8D9 126 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 TTTY10Q9BZA0 68 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 ZNF292O60281 2723 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 SPTBN4Q9H254 2564 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 ZNF236Q9UL36 1845 aa2.26□□□□□ -2.05
SKP1-211ENST00000523359 TPRP12270 2363 aaKnown RBP2.25□□□□□ -2.05
SKP1-211ENST00000523359 FREM1Q5H8C1 2179 aa2.25□□□□□ -2.05
SKP1-211ENST00000523359 UBR3Q6ZT12 1888 aa2.25□□□□□ -2.05
SKP1-211ENST00000523359 ZNF137PP52743 207 aa2.25□□□□□ -2.05
SKP1-211ENST00000523359 LINC00322Q6ZN03 302 aaPredicted RBP2.25□□□□□ -2.05
SKP1-211ENST00000523359 TMEM263Q8WUH6 116 aaKnown RBP2.25□□□□□ -2.05
SKP1-211ENST00000523359 WFDC10AQ9H1F0 79 aa2.25□□□□□ -2.05
SKP1-211ENST00000523359 DNAJC13O75165 2243 aa2.25□□□□□ -2.05
SKP1-211ENST00000523359 JMJD1CQ15652 2540 aa2.24□□□□□ -2.05
SKP1-211ENST00000523359 IGKV2-29A2NJV5 120 aaPredicted RBP2.24□□□□□ -2.05
SKP1-211ENST00000523359 CCL22O00626 93 aa2.24□□□□□ -2.05
SKP1-211ENST00000523359 UQCR11O14957 56 aa2.24□□□□□ -2.05
SKP1-211ENST00000523359 DNAL4O96015 105 aa2.24□□□□□ -2.05
SKP1-211ENST00000523359 IAPPP10997 89 aa2.24□□□□□ -2.05
SKP1-211ENST00000523359 Q6ZRN7 208 aaPredicted RBP2.24□□□□□ -2.05
SKP1-211ENST00000523359 CFAP54Q96N23 3096 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 MAP1BP46821 2468 aaKnown RBP2.23□□□□□ -2.05
SKP1-211ENST00000523359 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 D6R8Y8 96 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 M0R135 149 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 COX6B1P14854 86 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 TFF3Q07654 80 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 MUSTN1Q8IVN3 82 aa2.23□□□□□ -2.05
SKP1-211ENST00000523359 ZNF625Q96I27 306 aaPredicted RBP2.23□□□□□ -2.05
SKP1-211ENST00000523359 TMEM14CQ9P0S9 112 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms