RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
CTNNA1-237ENST00000523275 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 TMEM238C9JI98 176 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 PRLHP81277 87 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
CTNNA1-237ENST00000523275 M0R378 163 aa6.84□□□□□ -1.31
CTNNA1-237ENST00000523275 Q8NDZ9 215 aa6.84□□□□□ -1.31
CTNNA1-237ENST00000523275 LINC00158P58513 81 aa6.83□□□□□ -1.32
CTNNA1-237ENST00000523275 PLEKHB2Q96CS7 222 aa6.83□□□□□ -1.32
CTNNA1-237ENST00000523275 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-237ENST00000523275 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
CTNNA1-237ENST00000523275 CBLN2Q8IUK8 224 aa6.82□□□□□ -1.32
CTNNA1-237ENST00000523275 RETNLBQ9BQ08 111 aa6.82□□□□□ -1.32
CTNNA1-237ENST00000523275 MUC2Q02817 5179 aa6.81□□□□□ -1.32
CTNNA1-237ENST00000523275 APOC3P02656 99 aa6.81□□□□□ -1.32
CTNNA1-237ENST00000523275 CTAG1AP78358 180 aa6.81□□□□□ -1.32
CTNNA1-237ENST00000523275 A0A0U1RRA0 63 aa6.8□□□□□ -1.32
CTNNA1-237ENST00000523275 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
CTNNA1-237ENST00000523275 SNAPINO95295 136 aa6.8□□□□□ -1.32
CTNNA1-237ENST00000523275 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
CTNNA1-237ENST00000523275 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 TRAV12-1A0A0B4J245 112 aa6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 ATP6V1G1O75348 118 aa6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 SVBPQ8N300 66 aa6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 CHCHD1Q96BP2 118 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-237ENST00000523275 NDUFA5Q16718 116 aa6.78□□□□□ -1.32
CTNNA1-237ENST00000523275 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
CTNNA1-237ENST00000523275 SMIM13P0DJ93 91 aa6.77□□□□□ -1.33
CTNNA1-237ENST00000523275 TPRXLQ17RH7 258 aa6.77□□□□□ -1.33
CTNNA1-237ENST00000523275 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
CTNNA1-237ENST00000523275 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
CTNNA1-237ENST00000523275 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
CTNNA1-237ENST00000523275 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
CTNNA1-237ENST00000523275 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
CTNNA1-237ENST00000523275 ZNF706Q9Y5V0 76 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-237ENST00000523275 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
CTNNA1-237ENST00000523275 PRYO14603 147 aa6.75□□□□□ -1.33
CTNNA1-237ENST00000523275 HERV-K104P63124 156 aa6.75□□□□□ -1.33
CTNNA1-237ENST00000523275 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
CTNNA1-237ENST00000523275 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
CTNNA1-237ENST00000523275 LINC00337Q8N6G1 96 aa6.74□□□□□ -1.33
CTNNA1-237ENST00000523275 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
CTNNA1-237ENST00000523275 MYMXA0A1B0GTQ4 84 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 NCR3O14931 201 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 HSBP1O75506 76 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 SPRR1AP35321 89 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 FAM19A2Q8N3H0 131 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
CTNNA1-237ENST00000523275 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
CTNNA1-237ENST00000523275 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
CTNNA1-237ENST00000523275 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-237ENST00000523275 Q8NBF4 154 aa6.71□□□□□ -1.34
CTNNA1-237ENST00000523275 H0Y8G0 127 aa6.7□□□□□ -1.34
CTNNA1-237ENST00000523275 S100A12P80511 92 aa6.7□□□□□ -1.34
CTNNA1-237ENST00000523275 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
CTNNA1-237ENST00000523275 DAND5Q8N907 189 aa6.7□□□□□ -1.34
CTNNA1-237ENST00000523275 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
CTNNA1-237ENST00000523275 LEPROTO15243 131 aa6.69□□□□□ -1.34
CTNNA1-237ENST00000523275 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
CTNNA1-237ENST00000523275 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
CTNNA1-237ENST00000523275 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
CTNNA1-237ENST00000523275 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
CTNNA1-237ENST00000523275 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
CTNNA1-237ENST00000523275 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
CTNNA1-237ENST00000523275 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
CTNNA1-237ENST00000523275 B5MCH6 92 aa6.67□□□□□ -1.34
CTNNA1-237ENST00000523275 SPINK1P00995 79 aa6.67□□□□□ -1.34
CTNNA1-237ENST00000523275 TRGC2P03986 189 aa6.67□□□□□ -1.34
CTNNA1-237ENST00000523275 PLNP26678 52 aa6.67□□□□□ -1.34
CTNNA1-237ENST00000523275 J3QQQ9 107 aa6.66□□□□□ -1.34
CTNNA1-237ENST00000523275 SERF1AO75920 110 aa6.66□□□□□ -1.34
CTNNA1-237ENST00000523275 DDTP30046 118 aa6.66□□□□□ -1.34
CTNNA1-237ENST00000523275 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 DPM2O94777 84 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 LINC00310P59036 64 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
CTNNA1-237ENST00000523275 FABP4P15090 132 aa6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 NMUP48645 174 aa6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 HERVK_113P61574 105 aa6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 SSBP3-AS1Q7Z2R9 100 aa6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 MIEN1Q9BRT3 115 aa6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-237ENST00000523275 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 MOBPQ13875 183 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 Q6ZRX8 168 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 PMCHL2Q9BQD1 86 aa6.63□□□□□ -1.35
CTNNA1-237ENST00000523275 Q9BRP9 147 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms