RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 SS18Q15532 418 aa5.05□□□□□ -1.6
GM2A-202ENST00000523004 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
GM2A-202ENST00000523004 LINC00242Q5T6M2 205 aa5.05□□□□□ -1.6
GM2A-202ENST00000523004 IGHV3-64A0A075B6Q5 118 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 IFITM1P13164 125 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 TSPEAR-AS2P59090 65 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 RBX1P62877 108 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 Q6ZRU5 148 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 FAM104AQ969W3 186 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 CDKN2A-AS1Q9UH64 79 aa5.04□□□□□ -1.6
GM2A-202ENST00000523004 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 H3BUT2 72 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 CNBPP62633 177 aaKnown RBP5.03□□□□□ -1.6
GM2A-202ENST00000523004 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 LINC01561Q8N1V8 128 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 LINC00269Q8N2A0 174 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
GM2A-202ENST00000523004 TNXBP22105 4242 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 LRP2P98164 4655 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 SMIM1B2RUZ4 78 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 K7EP34 96 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
GM2A-202ENST00000523004 A0A087WZ39 114 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 TRAV8-4A0A0B4J246 113 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 K7ERJ3 54 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 PRSS2P07478 247 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 REG3AQ06141 175 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 PRO1854Q9UHT4 67 aa5.01□□□□□ -1.61
GM2A-202ENST00000523004 RNF213Q63HN8 5207 aa5□□□□□ -1.61
GM2A-202ENST00000523004 IGLV10-54A0A075B6I4 117 aa5□□□□□ -1.61
GM2A-202ENST00000523004 TRBV20-1A0A075B6N2 111 aa5□□□□□ -1.61
GM2A-202ENST00000523004 A0A087WYN8 130 aa5□□□□□ -1.61
GM2A-202ENST00000523004 LINC00959A0A1B0GUT2 108 aa5□□□□□ -1.61
GM2A-202ENST00000523004 SLPIP03973 132 aa5□□□□□ -1.61
GM2A-202ENST00000523004 CXCL5P42830 114 aa5□□□□□ -1.61
GM2A-202ENST00000523004 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
GM2A-202ENST00000523004 COX7B2Q8TF08 81 aa5□□□□□ -1.61
GM2A-202ENST00000523004 IGLV4-60A0A075B6I1 120 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 IGKV3OR2-268A0A0C4DH90 116 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 APOMO95445 188 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 COX6A2Q02221 97 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 CD164L2Q6UWJ8 174 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 SPACA4Q8TDM5 124 aa4.99□□□□□ -1.61
GM2A-202ENST00000523004 A4D1N5 150 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 COX7A2LO14548 114 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 COX6CP09669 75 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 MALP21145 153 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 Q1RN00 199 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 MUSTN1Q8IVN3 82 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 DPH3Q96FX2 82 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
GM2A-202ENST00000523004 PLAC8Q9NZF1 115 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 ERG28Q9UKR5 140 aa4.98□□□□□ -1.61
GM2A-202ENST00000523004 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 CFC1BP0CG36 223 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 CFC1P0CG37 223 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 XCL1P47992 114 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 PSMB2P49721 201 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 CKS1BP61024 79 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 Q8IZM0 81 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 LITAFQ99732 161 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 CBY1Q9Y3M2 126 aa4.97□□□□□ -1.61
GM2A-202ENST00000523004 F8W1H4 67 aa4.96□□□□□ -1.62
GM2A-202ENST00000523004 TSPAN13O95857 204 aa4.96□□□□□ -1.62
GM2A-202ENST00000523004 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
GM2A-202ENST00000523004 C15orf56Q8N910 161 aa4.96□□□□□ -1.62
GM2A-202ENST00000523004 CHCHD10Q8WYQ3 142 aaPredicted RBP4.96□□□□□ -1.62
GM2A-202ENST00000523004 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
GM2A-202ENST00000523004 J3QR89 54 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 K7ERU9 68 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 COX17Q14061 63 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 LINC00308Q8TCZ7 52 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 C7orf33Q8WU49 177 aa4.95□□□□□ -1.62
GM2A-202ENST00000523004 NAA38Q9BRA0 125 aaKnown RBP4.95□□□□□ -1.62
GM2A-202ENST00000523004 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
GM2A-202ENST00000523004 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
GM2A-202ENST00000523004 PCP4P48539 62 aa4.94□□□□□ -1.62
GM2A-202ENST00000523004 LINC00158P58513 81 aa4.94□□□□□ -1.62
GM2A-202ENST00000523004 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
GM2A-202ENST00000523004 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
GM2A-202ENST00000523004 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
GM2A-202ENST00000523004 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
GM2A-202ENST00000523004 ADAMTSL4-AS1Q5T5F5 129 aa4.93□□□□□ -1.62
GM2A-202ENST00000523004 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
GM2A-202ENST00000523004 IGKV2-24A0A0C4DH68 120 aa4.92□□□□□ -1.62
GM2A-202ENST00000523004 H7C2G1 150 aa4.92□□□□□ -1.62
GM2A-202ENST00000523004 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms