RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HLA-DRB4P13762 266 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 ZNF25P17030 456 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 S100PP25815 95 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 QRFPP83859 136 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 CLLU1Q5K131 121 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 RAB37Q96AX2 223 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 GGACTQ9BVM4 153 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 AP4S1Q9Y587 144 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 HLA-DRB4X5D2U9 266 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 KIAA1109Q2LD37 5005 aa1.34□□□□□ -2.2
HMGB1P1-201ENST00000522557 A0A087WSZ3 146 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRBV6-7A0A0A0MS04 114 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 LOC107984156A0A0G2JMH3 177 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 IGKV2-29A2NJV5 120 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 ZNF727A8MUV8 499 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 INE1O15225 51 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 NCR2O95944 276 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRACP01848 142 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 ANGP03950 147 aaKnown RBP1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 DEFB130BP0DP73 79 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 DEFB130AP0DP74 79 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 SLC25A4P12235 298 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 CKS2P33552 79 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 CIRBPQ14011 172 aaKnown RBP1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 PSMG4Q5JS54 123 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 Q5VSD8 79 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 TMEM91Q6ZNR0 172 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 ARL17AQ8IVW1 177 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 Q8N814 137 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 DEFB104AQ8WTQ1 72 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 HYLS1Q96M11 299 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 LINC00052Q96N35 136 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 C12orf57Q99622 126 aa1.33□□□□□ -2.2
HMGB1P1-201ENST00000522557 ALMS1Q8TCU4 4167 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRAV30A0A087WSZ9 112 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 C3orf85A0A1B0GTC6 90 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 PNMA8CA0A1B0GUJ8 204 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 TCRBV3S1A0A5B6 114 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 IGLC7A0M8Q6 106 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 E7EUB6 86 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 F6UZH7 168 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 HYPMO75409 117 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 SNCAP37840 140 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 CATR1Q13166 79 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 KLK9Q2XQG4 91 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 IZUMO2Q6UXV1 221 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 LSM10Q969L4 123 aaKnown RBP1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 ARHGAP5-AS1Q96IT6 56 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 TCEAL7Q9BRU2 100 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 TMEM191AQ9H0A3 160 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 SLC35B3Q9H1N7 401 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 BET1LQ9NYM9 111 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 TAS2R8Q9NYW2 309 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 KLK9Q9UKQ9 250 aa1.32□□□□□ -2.2
HMGB1P1-201ENST00000522557 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 TRBV6-8A0A0A6YYG3 113 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 LOC100130705A0A1B0GUX0 176 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 C9orf170A2RU37 121 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 TMEM14DPA8MWL7 114 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 K7EIM0 57 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 PDCD5O14737 125 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 CD3DP04234 171 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 HTN1P15515 57 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 ETV6P41212 452 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 GNGT1P63211 74 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 MRPS10P82664 201 aaKnown RBP1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 XAF1Q6GPH4 301 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 C2orf82Q6UX34 121 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 TEN1Q86WV5 123 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 CIB3Q96Q77 187 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 PSMG3Q9BT73 122 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 PDCD10Q9BUL8 212 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 ATG5Q9H1Y0 275 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 DPH3P1Q9H4G8 78 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 NDUFA4L2Q9NRX3 87 aa1.31□□□□□ -2.2
HMGB1P1-201ENST00000522557 A0A087WTM6 91 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 IGHV1-24A0A0C4DH33 117 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 A0A0J9YY99 117 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 I3L2K1 104 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 CORTO00230 105 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 ERC2-IT1O76042 136 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 AKAIN1P0CW23 69 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 ARL14EPLP0DKL9 152 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 PYYP10082 97 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 HIST1H1DP16402 221 aaKnown RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 FXYD4P59646 89 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 GNG2P59768 71 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 OCIAD2Q56VL3 154 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 CASC2Q6XLA1 102 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 FOXI2Q6ZQN5 318 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 ATOH7Q8N100 152 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 KCNRGQ8N5I3 272 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 SMIM7Q9BQ49 75 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 NOP10Q9NPE3 64 aaKnown RBP1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 RPRMQ9NS64 109 aa1.3□□□□□ -2.2
HMGB1P1-201ENST00000522557 LSM2Q9Y333 95 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms