RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 Q8TAT8 98 aa3.77□□□□□ -1.81
NUDCD1-204ENST00000521439 LINC00208Q96KT6 92 aa3.77□□□□□ -1.81
NUDCD1-204ENST00000521439 FAM215AQ9Y5M1 114 aa3.77□□□□□ -1.81
NUDCD1-204ENST00000521439 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
NUDCD1-204ENST00000521439 ARFGEF3Q5TH69 2177 aa3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 MUC4Q99102 2169 aa3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 NDUFA1O15239 70 aa3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 PDE6GP18545 87 aa3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 RPL39LQ96EH5 51 aaKnown RBP3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 SVILO95425 2214 aa3.76□□□□□ -1.81
NUDCD1-204ENST00000521439 H3BPC8 53 aa3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 RNASE3P12724 160 aaKnown RBP3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 KPRPQ5T749 579 aaPredicted RBP3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 CIRBP-AS1Q8TBR5 109 aa3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 COX7B2Q8TF08 81 aa3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 HTTP42858 3142 aa3.75□□□□□ -1.81
NUDCD1-204ENST00000521439 A0A1W2PNM2 257 aa3.74□□□□□ -1.81
NUDCD1-204ENST00000521439 CCL3L1P16619 93 aa3.74□□□□□ -1.81
NUDCD1-204ENST00000521439 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
NUDCD1-204ENST00000521439 HIGD2AQ9BW72 106 aa3.74□□□□□ -1.81
NUDCD1-204ENST00000521439 ZGRF1Q86YA3 2104 aa3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 CLPSL1A2RUU4 121 aa3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 CNBPP62633 177 aaKnown RBP3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 LINC00308Q8TCZ7 52 aa3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 ZCCHC13Q8WW36 166 aaKnown RBP3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 TRANK1O15050 2925 aa3.73□□□□□ -1.81
NUDCD1-204ENST00000521439 H3BQ85 93 aa3.72□□□□□ -1.81
NUDCD1-204ENST00000521439 M0QY20 66 aa3.72□□□□□ -1.81
NUDCD1-204ENST00000521439 RPL39P62891 51 aaKnown RBP3.72□□□□□ -1.81
NUDCD1-204ENST00000521439 PLAC8Q9NZF1 115 aa3.72□□□□□ -1.81
NUDCD1-204ENST00000521439 NOTCH2Q04721 2471 aa3.71□□□□□ -1.81
NUDCD1-204ENST00000521439 ABCA1O95477 2261 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 HAMPP81172 84 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 LY6EQ16553 131 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 DEFB114Q30KQ6 69 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 C1orf137Q5JT78 98 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 PRR9Q5T870 116 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 MIR7-3HGQ8N6C7 128 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 WFDC10AQ9H1F0 79 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 UTRNP46939 3433 aa3.71□□□□□ -1.82
NUDCD1-204ENST00000521439 LOC110117498A0A087WWA1 95 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 ODF3BA8MYP8 253 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 H0Y9P7 68 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 MGPP08493 103 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 P0C880 135 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 DEFB113Q30KQ7 82 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 MINOS1Q5TGZ0 78 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 DEFB108BQ8NET1 73 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 MINOS1-NBL1R4GNA1 71 aa3.7□□□□□ -1.82
NUDCD1-204ENST00000521439 DEFB119Q8N690 84 aa3.69□□□□□ -1.82
NUDCD1-204ENST00000521439 ARHGAP32A7KAX9 2087 aa3.69□□□□□ -1.82
NUDCD1-204ENST00000521439 CHD9Q3L8U1 2897 aa3.69□□□□□ -1.82
NUDCD1-204ENST00000521439 NCR3O14931 201 aa3.68□□□□□ -1.82
NUDCD1-204ENST00000521439 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
NUDCD1-204ENST00000521439 CHD7Q9P2D1 2997 aa3.68□□□□□ -1.82
NUDCD1-204ENST00000521439 FAM186AA6NE01 2351 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 A8MUU9 505 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 H3BUA1 57 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 NDUFA4O00483 81 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 TMEM105Q8N8V8 129 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
NUDCD1-204ENST00000521439 APELAP0DMC3 54 aa3.66□□□□□ -1.82
NUDCD1-204ENST00000521439 PLCE1Q9P212 2302 aa3.65□□□□□ -1.82
NUDCD1-204ENST00000521439 UNC80Q8N2C7 3258 aa3.65□□□□□ -1.82
NUDCD1-204ENST00000521439 NUPR2A6NF83 97 aa3.65□□□□□ -1.83
NUDCD1-204ENST00000521439 A8MTW9 85 aa3.65□□□□□ -1.83
NUDCD1-204ENST00000521439 UQCR11O14957 56 aa3.65□□□□□ -1.83
NUDCD1-204ENST00000521439 SPINK7P58062 85 aa3.65□□□□□ -1.83
NUDCD1-204ENST00000521439 DNAH14Q0VDD8 3507 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 IGHV3-64A0A075B6Q5 118 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 IGHV3-53P01767 116 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 CCL18P55774 89 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 CADP27708 2225 aa3.64□□□□□ -1.83
NUDCD1-204ENST00000521439 KIAA0100Q14667 2235 aaKnown RBP3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 URB1O60287 2271 aaKnown RBP3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 DEFB112Q30KQ8 113 aa3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 USMG5Q96IX5 58 aa3.63□□□□□ -1.83
NUDCD1-204ENST00000521439 RANBP2P49792 3224 aaKnown RBP3.62□□□□□ -1.83
NUDCD1-204ENST00000521439 TRGV4A0A0C4DH28 118 aa3.62□□□□□ -1.83
NUDCD1-204ENST00000521439 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
NUDCD1-204ENST00000521439 BRCA2P51587 3418 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 WDR87Q6ZQQ6 2873 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 TRBV6-4A0A1B0GX49 114 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 KRTAP13-2Q52LG2 175 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 COA5Q86WW8 74 aa3.61□□□□□ -1.83
NUDCD1-204ENST00000521439 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
NUDCD1-204ENST00000521439 SZT2Q5T011 3432 aa3.6□□□□□ -1.83
NUDCD1-204ENST00000521439 IGKV3-7A0A075B6H7 116 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms