RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 IGHV1-18A0A0C4DH31 117 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 A6NED7 52 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 C10orf142B7Z368 130 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 H0YGX0 51 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 NDUFA1O15239 70 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 GNRH2O43555 120 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 PSCAO43653 123 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 CRPP02741 224 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 IGKV1-16P04430 117 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 RPL39P62891 51 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 WT1-ASQ06250 92 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 FDCSPQ8NFU4 85 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 LEAP2Q969E1 77 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 ZNF625Q96I27 306 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 LIMD2Q9BT23 127 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 CDC42SE1Q9NRR8 79 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 REV3LO60673 3130 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 NCOR2Q9Y618 2525 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 FN1P02751 2386 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 ACACBO00763 2458 aa1.42□□□□□ -2.18
TRAPPC13-212ENST00000520525 OTOGLQ3ZCN5 2332 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 IGSF10Q6WRI0 2623 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 FLNCQ14315 2725 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 TRBV6-8A0A0A6YYG3 113 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 TRBV10-1A0A0K0K1A3 114 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 LECT2O14960 151 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 PRM2P04554 102 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 HAMPP81172 84 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 C9orf116Q5BN46 136 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 C10orf55Q5SWW7 151 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 CASC2Q6XLA1 102 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 DEFB132Q7Z7B7 95 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 CCL4L1Q8NHW4 92 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 TMEM167AQ8TBQ9 72 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 GVINP1Q7Z2Y8 2422 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 CNOT1A5YKK6 2376 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 CEP290O15078 2479 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 MKI67P46013 3256 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-212ENST00000520525 MYO7BQ6PIF6 2116 aa1.4□□□□□ -2.18
TRAPPC13-212ENST00000520525 LOC110117498A0A087WWA1 95 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 IGHV3-21A0A0B4J1V1 117 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 TRBV6-5A0A0K0K1A5 114 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 C3orf84H3BNL1 204 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 H3BQ85 93 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 LY6HO94772 140 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 TFF1P04155 84 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 RPL27AP46776 148 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 POLR2KP53803 58 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 ASB16-AS1Q495Z4 193 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 HIGD2AQ9BW72 106 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 FBN2P35556 2912 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 FLNAP21333 2647 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 SDK2Q58EX2 2172 aa1.4□□□□□ -2.19
TRAPPC13-212ENST00000520525 SPAG17Q6Q759 2223 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 IGLV3-9A0A075B6K5 115 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 LCE6AA0A183 80 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 C19orf84I3L1E1 186 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 I3L2K1 104 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 NDUFB1O75438 58 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 PRB1P04280 392 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 PDE6GP18545 87 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 ELOF1P60002 83 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 KRTAP25-1Q3LHN0 102 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 Q6ZQT0 140 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 RETNLBQ9BQ08 111 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 Q9BRP9 147 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 CDC42SE2Q9NRR3 84 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 EP400Q96L91 3159 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 ALPK2Q86TB3 2170 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 MED12Q93074 2177 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 CFAP54Q96N23 3096 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 TLN1Q9Y490 2541 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 TEX15Q9BXT5 2789 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 ESPL1Q14674 2120 aa1.39□□□□□ -2.19
TRAPPC13-212ENST00000520525 SPTBN5Q9NRC6 3674 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 ZFYVE26Q68DK2 2539 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 PIEZO2Q9H5I5 2752 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 NBEAL1Q6ZS30 2694 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 PCNX1Q96RV3 2341 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 MRPL33O75394 65 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 CGB3P0DN86 165 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 CGB7P0DN87 165 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 PRB3Q04118 309 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 BSPH1Q075Z2 132 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 FAM74A4Q5TZK3 123 aa1.38□□□□□ -2.19
TRAPPC13-212ENST00000520525 Q6ZTI0 123 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms