RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 PPDPFQ9H3Y8 114 aa3.85□□□□□ -1.79
CTNNA1-220ENST00000520260 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 A0A0J9YXV3 536 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 H7C2G1 150 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 UQCRQO14949 82 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 SS18Q15532 418 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 Q6ZSN1 163 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 C3orf22Q8N5N4 141 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 Q9HAA7 133 aa3.84□□□□□ -1.79
CTNNA1-220ENST00000520260 IGKV2D-24A0A075B6R9 120 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 DAND5Q8N907 189 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-220ENST00000520260 COX7A2LO14548 114 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 TRACP01848 142 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 REG3AQ06141 175 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 ADAMTSL4-AS1Q5T5F5 129 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
CTNNA1-220ENST00000520260 IGLV5-45A0A087WSX0 123 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 J3KT08 172 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 NDUFA1O15239 70 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 CRYGAP11844 174 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 COX7CP15954 63 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 MALP21145 153 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 HIST1H4AP62805 103 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 LINC00269Q8N2A0 174 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 CLEC2BQ92478 149 aa3.81□□□□□ -1.8
CTNNA1-220ENST00000520260 IGHV3-64A0A075B6Q5 118 aa3.8□□□□□ -1.8
CTNNA1-220ENST00000520260 PRSS2P07478 247 aa3.8□□□□□ -1.8
CTNNA1-220ENST00000520260 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
CTNNA1-220ENST00000520260 PRR34Q9NV39 138 aa3.8□□□□□ -1.8
CTNNA1-220ENST00000520260 NACAE9PAV3 2078 aa3.8□□□□□ -1.8
CTNNA1-220ENST00000520260 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 IGLV5-52A0A0A0MRZ9 124 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 IGKV2-29A2NJV5 120 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 C16orf90A8MZG2 172 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 F8WDY8 70 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 ATOX1O00244 68 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 HERVK_113P63121 156 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 CIRBPQ14011 172 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 NTM-AS1Q6ZSK4 140 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 FAM19A3Q7Z5A8 133 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 SMCR5Q8TEV8 140 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
CTNNA1-220ENST00000520260 A0A087WTM6 91 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 IGKV3OR2-268A0A0C4DH90 116 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 ZNF561-AS1K7EIQ3 104 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 Q6JHZ5 121 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 CD164L2Q6UWJ8 174 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 Q8N814 137 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 LINC00308Q8TCZ7 52 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 CDC42SE2Q9NRR3 84 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 LINC00474Q9P2X8 69 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 UBE2D4Q9Y2X8 147 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.8
CTNNA1-220ENST00000520260 H3BS24 57 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 RTL8CO15255 209 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 BAALC-AS2P0C853 105 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 TMEM258P61165 79 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 GAGE2AQ6NT46 116 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 CLPSL2Q6UWE3 100 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 OR13C6PQ8NH95 151 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 CHCHD10Q8WYQ3 142 aaPredicted RBP3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 C22orf24Q9Y442 160 aa3.77□□□□□ -1.81
CTNNA1-220ENST00000520260 TRAV13-1A0A0B4J241 112 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 RPL28P46779 137 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 XCL1P47992 114 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 ENHOQ6UWT2 76 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 DEFB104AQ8WTQ1 72 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 OBSCN-AS1Q96MR7 158 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 KRTAP1-5Q9BYS1 174 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 Q9UF83 564 aa3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.76□□□□□ -1.81
CTNNA1-220ENST00000520260 IGLV4-60A0A075B6I1 120 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 IGLV10-54A0A075B6I4 117 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 USP17L23D6RBM5 183 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 SOSTDC1Q6X4U4 206 aa3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 FAM19A5Q7Z5A7 132 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-220ENST00000520260 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms