RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TOMM5Q8N4H5 51 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 SPRR4Q96PI1 79 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 WFDC6Q9BQY6 131 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 PROK2Q9HC23 129 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 NRXN3Q9Y4C0 1643 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 ABCC6O95255 1503 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 LRRC37A2A6NM11 1700 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 DDX60LQ5H9U9 1706 aaKnown RBP1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 PLXNB2O15031 1838 aa1.34□□□□□ -2.19
HMGB1P46-201ENST00000520062 CTXND1A0A1B0GTU2 59 aa1.34□□□□□ -2.19
HMGB1P46-201ENST00000520062 Q6ZQY7 126 aa1.34□□□□□ -2.19
HMGB1P46-201ENST00000520062 PLAC8Q9NZF1 115 aa1.34□□□□□ -2.19
HMGB1P46-201ENST00000520062 NRAPQ86VF7 1730 aa1.34□□□□□ -2.2
HMGB1P46-201ENST00000520062 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.2
HMGB1P46-201ENST00000520062 LRP6O75581 1613 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 BPTFQ12830 3046 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 LINC01549A6NIU2 74 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 M0R3E3 92 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 FXYD3Q14802 87 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 SPATA8Q6RVD6 105 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 NMES1Q9C002 83 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 CPS1P31327 1500 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 EFCAB6Q5THR3 1501 aa1.33□□□□□ -2.2
HMGB1P46-201ENST00000520062 A0A087WVE0 104 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 H0Y9P7 68 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 IFI6P09912 130 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 C10orf113Q5VZT2 155 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 C5orf56Q8N8D9 126 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 TMEM263Q8WUH6 116 aaKnown RBP1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 SAMD9Q5K651 1589 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 FAM208AQ9UK61 1670 aaKnown RBP1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 QSER1Q2KHR3 1735 aa1.32□□□□□ -2.2
HMGB1P46-201ENST00000520062 NWD1Q149M9 1564 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 A0A087WTM6 91 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 LCE6AA0A183 80 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 PRH1P02810 166 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 S100A3P33764 101 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 SERF2P84101 59 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 ZDBF2Q9HCK1 2354 aa1.31□□□□□ -2.2
HMGB1P46-201ENST00000520062 AGLP35573 1532 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 ABCC8Q09428 1581 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 DOT1LQ8TEK3 1739 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 DOPEY2Q9Y3R5 2298 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 CAV3P56539 151 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 NREPQ16612 68 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 NCBP2-AS2Q69YL0 99 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 DEFB107AQ8IZN7 70 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 UBL5Q9BZL1 73 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 CMC2Q9NRP2 79 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 CNOT1A5YKK6 2376 aaKnown RBP1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 TRPM2O94759 1503 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 NFAT5O94916 1531 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 ASXL3Q9C0F0 2248 aa1.3□□□□□ -2.2
HMGB1P46-201ENST00000520062 ZNF831Q5JPB2 1677 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 A0A0G2JMZ2 1700 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 DDX60Q8IY21 1712 aaKnown RBP1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 FBN3Q75N90 2809 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 TRAV1-2A0A0B4J238 106 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 TRAV21A0A0B4J279 112 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 WFDC9Q8NEX5 89 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 FDCSPQ8NFU4 85 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 Q96NJ1 140 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 CCL19Q99731 98 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 CNTRLQ7Z7A1 2325 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 ZMYM4Q5VZL5 1548 aa1.29□□□□□ -2.2
HMGB1P46-201ENST00000520062 ZFHX3Q15911 3703 aa1.28□□□□□ -2.2
HMGB1P46-201ENST00000520062 TRGV1A0A0A0MS02 117 aa1.28□□□□□ -2.2
HMGB1P46-201ENST00000520062 ACYP2P14621 99 aa1.28□□□□□ -2.2
HMGB1P46-201ENST00000520062 ABRACLQ9P1F3 81 aa1.28□□□□□ -2.2
HMGB1P46-201ENST00000520062 LRRC37AA6NMS7 1700 aa1.28□□□□□ -2.2
HMGB1P46-201ENST00000520062 K7EIL1 84 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 K7EMI3 77 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 FCER1GP30273 86 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 LINC00472Q9H8W2 130 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 TENM1Q9UKZ4 2725 aa1.27□□□□□ -2.21
HMGB1P46-201ENST00000520062 PIN1P1O15428 100 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 PLNP26678 52 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 SPINK7P58062 85 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 DEFB114Q30KQ6 69 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 DEFB112Q30KQ8 113 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 ENHOQ6UWT2 76 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
HMGB1P46-201ENST00000520062 A0A1B0GU69 56 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 RPL38P63173 70 aaKnown RBP1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 SMIM11BQ8TCY0 68 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 TOGARAM1Q9Y4F4 1720 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 IQGAP1P46940 1657 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 TULP4Q9NRJ4 1543 aa1.25□□□□□ -2.21
HMGB1P46-201ENST00000520062 PLCE1Q9P212 2302 aa1.24□□□□□ -2.21
HMGB1P46-201ENST00000520062 SMIM27A0A1W2PRY6 76 aa1.24□□□□□ -2.21
HMGB1P46-201ENST00000520062 SPINK13Q1W4C9 94 aa1.24□□□□□ -2.21
HMGB1P46-201ENST00000520062 ATP7AQ04656 1500 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms