RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 C3orf22Q8N5N4 141 aa4.99□□□□□ -1.61
PABPC1-213ENST00000519848 CARHSP1Q9Y2V2 147 aaKnown RBP4.99□□□□□ -1.61
PABPC1-213ENST00000519848 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
PABPC1-213ENST00000519848 PFN2P35080 140 aa4.98□□□□□ -1.61
PABPC1-213ENST00000519848 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
PABPC1-213ENST00000519848 CXCL5P42830 114 aa4.98□□□□□ -1.61
PABPC1-213ENST00000519848 C18orf32Q8TCD1 76 aa4.98□□□□□ -1.61
PABPC1-213ENST00000519848 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
PABPC1-213ENST00000519848 GNB1LQ9BYB4 327 aa4.98□□□□□ -1.61
PABPC1-213ENST00000519848 SND1-IT1Q9HBX3 110 aa4.98□□□□□ -1.61
PABPC1-213ENST00000519848 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 PMVKQ15126 192 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 COMMD7Q86VX2 200 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 YPEL4Q96NS1 127 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
PABPC1-213ENST00000519848 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
PABPC1-213ENST00000519848 SEC11AP67812 179 aa4.96□□□□□ -1.62
PABPC1-213ENST00000519848 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-213ENST00000519848 UQCC3Q6UW78 93 aa4.96□□□□□ -1.62
PABPC1-213ENST00000519848 TYMSOSQ8TAI1 123 aa4.96□□□□□ -1.62
PABPC1-213ENST00000519848 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
PABPC1-213ENST00000519848 TMEM126AQ9H061 195 aa4.96□□□□□ -1.62
PABPC1-213ENST00000519848 CRYGAP11844 174 aa4.95□□□□□ -1.62
PABPC1-213ENST00000519848 RAB14P61106 215 aa4.95□□□□□ -1.62
PABPC1-213ENST00000519848 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
PABPC1-213ENST00000519848 FABP9Q0Z7S8 132 aa4.94□□□□□ -1.62
PABPC1-213ENST00000519848 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
PABPC1-213ENST00000519848 FA2HQ7L5A8 372 aa4.94□□□□□ -1.62
PABPC1-213ENST00000519848 UBE2AP49459 152 aa4.93□□□□□ -1.62
PABPC1-213ENST00000519848 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
PABPC1-213ENST00000519848 C21orf62-AS1Q17RA5 79 aa4.93□□□□□ -1.62
PABPC1-213ENST00000519848 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
PABPC1-213ENST00000519848 RPS10P5Q9NQ39 176 aa4.93□□□□□ -1.62
PABPC1-213ENST00000519848 A0A0U1RRA0 63 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 ATP5LO75964 103 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 NDUFA6P56556 154 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 FAM19A1Q7Z5A9 133 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 NKAPP1Q8N9T2 125 aa4.92□□□□□ -1.62
PABPC1-213ENST00000519848 C9orf118A6NHY6 69 aa4.91□□□□□ -1.62
PABPC1-213ENST00000519848 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
PABPC1-213ENST00000519848 HBDP02042 147 aa4.91□□□□□ -1.62
PABPC1-213ENST00000519848 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
PABPC1-213ENST00000519848 TMEM223A0PJW6 202 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 LINC00614P0C842 121 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 S100PP25815 95 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 RHEBQ15382 184 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 DAND5Q8N907 189 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 SPRR4Q96PI1 79 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 SMCO4Q9NRQ5 59 aa4.9□□□□□ -1.63
PABPC1-213ENST00000519848 NCR3O14931 201 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 ERC2-IT1O76042 136 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 SPRR1AP35321 89 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 HIGD2AQ9BW72 106 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 TRAPPC1Q9Y5R8 145 aa4.89□□□□□ -1.63
PABPC1-213ENST00000519848 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 H3BRM9 83 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 G0S2P27469 103 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-213ENST00000519848 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 SMCR5Q8TEV8 140 aa4.88□□□□□ -1.63
PABPC1-213ENST00000519848 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
PABPC1-213ENST00000519848 CBLN2Q8IUK8 224 aa4.87□□□□□ -1.63
PABPC1-213ENST00000519848 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
PABPC1-213ENST00000519848 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
PABPC1-213ENST00000519848 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 APOC3P02656 99 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 COX17Q14061 63 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 COX19Q49B96 90 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 Q8NBF4 154 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 Q9BRP9 147 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
PABPC1-213ENST00000519848 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
PABPC1-213ENST00000519848 LINC00158P58513 81 aa4.85□□□□□ -1.63
PABPC1-213ENST00000519848 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
PABPC1-213ENST00000519848 IFI27L1Q96BM0 104 aa4.85□□□□□ -1.63
PABPC1-213ENST00000519848 TRAV12-1A0A0B4J245 112 aa4.84□□□□□ -1.63
PABPC1-213ENST00000519848 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
PABPC1-213ENST00000519848 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
PABPC1-213ENST00000519848 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
PABPC1-213ENST00000519848 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
PABPC1-213ENST00000519848 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
PABPC1-213ENST00000519848 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
PABPC1-213ENST00000519848 B5MCH6 92 aa4.82□□□□□ -1.64
PABPC1-213ENST00000519848 PRYO14603 147 aa4.82□□□□□ -1.64
PABPC1-213ENST00000519848 SERF1AO75920 110 aa4.82□□□□□ -1.64
PABPC1-213ENST00000519848 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
PABPC1-213ENST00000519848 H0Y8G0 127 aa4.81□□□□□ -1.64
PABPC1-213ENST00000519848 MOBPQ13875 183 aa4.81□□□□□ -1.64
PABPC1-213ENST00000519848 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
PABPC1-213ENST00000519848 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
PABPC1-213ENST00000519848 NDUFA12Q9UI09 145 aa4.81□□□□□ -1.64
PABPC1-213ENST00000519848 TRGC2P03986 189 aa4.8□□□□□ -1.64
PABPC1-213ENST00000519848 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms