RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CELSR2Q9HCU4 2923 aa0.6□□□□□ -2.31
PTPN12-213ENST00000519553 RGPD8O14715 1765 aaPredicted RBP0.6□□□□□ -2.31
PTPN12-213ENST00000519553 RGPD5Q99666 1765 aa0.6□□□□□ -2.31
PTPN12-213ENST00000519553 USF3Q68DE3 2245 aa0.6□□□□□ -2.31
PTPN12-213ENST00000519553 ZNF292O60281 2723 aa0.59□□□□□ -2.31
PTPN12-213ENST00000519553 KIF20BQ96Q89 1820 aa0.59□□□□□ -2.31
PTPN12-213ENST00000519553 LRRIQ1Q96JM4 1722 aa0.59□□□□□ -2.31
PTPN12-213ENST00000519553 CEP170BQ9Y4F5 1589 aaPredicted RBP0.59□□□□□ -2.31
PTPN12-213ENST00000519553 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
PTPN12-213ENST00000519553 Q5VSD8 79 aa0.59□□□□□ -2.31
PTPN12-213ENST00000519553 ATP5EP2Q5VTU8 51 aa0.59□□□□□ -2.31
PTPN12-213ENST00000519553 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.32
PTPN12-213ENST00000519553 MAGI3Q5TCQ9 1506 aa0.59□□□□□ -2.32
PTPN12-213ENST00000519553 TPRP12270 2363 aaKnown RBP0.59□□□□□ -2.32
PTPN12-213ENST00000519553 QSER1Q2KHR3 1735 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 LTN1O94822 1766 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 RGPD2P0DJD1 1756 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 USP32Q8NFA0 1604 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 DEFB112Q30KQ8 113 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 USMG5Q96IX5 58 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 PPRC1Q5VV67 1664 aaKnown RBP0.58□□□□□ -2.32
PTPN12-213ENST00000519553 LRRC7Q96NW7 1537 aa0.58□□□□□ -2.32
PTPN12-213ENST00000519553 PIK3C2BO00750 1634 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 NDUFB1O75438 58 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 PRH1P02810 166 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 SCN11AQ9UI33 1791 aa0.57□□□□□ -2.32
PTPN12-213ENST00000519553 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
PTPN12-213ENST00000519553 ZNF831Q5JPB2 1677 aa0.56□□□□□ -2.32
PTPN12-213ENST00000519553 TRAV21A0A0B4J279 112 aa0.56□□□□□ -2.32
PTPN12-213ENST00000519553 COX6B1P14854 86 aa0.56□□□□□ -2.32
PTPN12-213ENST00000519553 PTPRQQ9UMZ3 2332 aa0.56□□□□□ -2.32
PTPN12-213ENST00000519553 POLR1AO95602 1720 aaPredicted RBP0.55□□□□□ -2.32
PTPN12-213ENST00000519553 CD163L1Q9NR16 1453 aa0.55□□□□□ -2.32
PTPN12-213ENST00000519553 GVINP1Q7Z2Y8 2422 aa0.55□□□□□ -2.32
PTPN12-213ENST00000519553 CFDP00746 253 aaPredicted RBP0.55□□□□□ -2.32
PTPN12-213ENST00000519553 COX7BP24311 80 aa0.55□□□□□ -2.32
PTPN12-213ENST00000519553 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
PTPN12-213ENST00000519553 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
PTPN12-213ENST00000519553 UBR3Q6ZT12 1888 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 FXYD6-FXYD2A0A087WZ82 144 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 GAFA1Q96PS6 74 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 CRIPTQ9P021 101 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 TNCP24821 2201 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.54□□□□□ -2.325e-6■■■■□ 22.8
PTPN12-213ENST00000519553 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
PTPN12-213ENST00000519553 SPTY2D1-AS1A0A0U1RR47 76 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 LCE6AA0A183 80 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 SMIM13P0DJ93 91 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 COX8AP10176 69 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
PTPN12-213ENST00000519553 SMR3AQ99954 134 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
PTPN12-213ENST00000519553 AKAP6Q13023 2319 aa0.53□□□□□ -2.33
PTPN12-213ENST00000519553 IQGAP3Q86VI3 1631 aa0.53□□□□□ -2.33
PTPN12-213ENST00000519553 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 FMN2Q9NZ56 1722 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 COL14A1Q05707 1796 aaKnown RBP0.52□□□□□ -2.33
PTPN12-213ENST00000519553 UMAD1C9J7I0 102 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 I3L3M4 83 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 PDCD5O14737 125 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 SPRR1AP35321 89 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 DNMBPQ6XZF7 1577 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 TIAM2Q8IVF5 1701 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 ARFGEF2Q9Y6D5 1785 aa0.52□□□□□ -2.33
PTPN12-213ENST00000519553 CNOT1A5YKK6 2376 aaKnown RBP0.51□□□□□ -2.33
PTPN12-213ENST00000519553 CPSF4LA6NMK7 179 aaKnown RBP0.51□□□□□ -2.33
PTPN12-213ENST00000519553 IFI6P09912 130 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 HMGA1P17096 107 aaKnown RBP0.51□□□□□ -2.33
PTPN12-213ENST00000519553 SPRR1BP22528 89 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 CLIP1P30622 1438 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 Q5BKY6 102 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 WFDC9Q8NEX5 89 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 DOT1LQ8TEK3 1739 aa0.51□□□□□ -2.33
PTPN12-213ENST00000519553 PKDREJQ9NTG1 2253 aa0.5□□□□□ -2.33
PTPN12-213ENST00000519553 TSC2P49815 1807 aa0.5□□□□□ -2.33
PTPN12-213ENST00000519553 ANKRD50Q9ULJ7 1429 aa0.5□□□□□ -2.33
PTPN12-213ENST00000519553 MRPL34Q9BQ48 92 aaKnown RBP0.5□□□□□ -2.33
PTPN12-213ENST00000519553 BCORQ6W2J9 1755 aa0.5□□□□□ -2.33
PTPN12-213ENST00000519553 CFAP43Q8NDM7 1665 aa0.49□□□□□ -2.33
PTPN12-213ENST00000519553 PREX1Q8TCU6 1659 aa0.49□□□□□ -2.33
PTPN12-213ENST00000519553 A0A087WXM4 84 aa0.49□□□□□ -2.33
PTPN12-213ENST00000519553 CCL22O00626 93 aa0.49□□□□□ -2.33
PTPN12-213ENST00000519553 RPL38P63173 70 aaKnown RBP0.49□□□□□ -2.33
PTPN12-213ENST00000519553 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
PTPN12-213ENST00000519553 DUOX2Q9NRD8 1548 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 DEFA5Q01523 94 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 NREPQ16612 68 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
PTPN12-213ENST00000519553 EIF2AK4Q9P2K8 1649 aaKnown RBP0.48□□□□□ -2.33
PTPN12-213ENST00000519553 ADAMTS12P58397 1594 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 NWD1Q149M9 1564 aa0.48□□□□□ -2.33
PTPN12-213ENST00000519553 CHD6Q8TD26 2715 aa0.47□□□□□ -2.33
PTPN12-213ENST00000519553 HEPN1Q6WQI6 88 aa0.47□□□□□ -2.33
PTPN12-213ENST00000519553 COX6B2Q6YFQ2 88 aa0.47□□□□□ -2.33
PTPN12-213ENST00000519553 REV3LO60673 3130 aa0.47□□□□□ -2.33
PTPN12-213ENST00000519553 IGF2RP11717 2491 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms