RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-206	ENST00000519115	IGLV5-52	A0A0A0MRZ9	124 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115		A0A1B0GWB2	263 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115	COL5A1-AS1	Q5SY13	56 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115	BVES-AS1	Q5T3Y7	98 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115		Q8N814	137 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115	PKIG	Q9Y2B9	76 aa		4.97	□□□□□ -1.61
SDCBP-206	ENST00000519115	DYNC1H1	Q14204	4646 aa	Known RBP	4.96	□□□□□ -1.61
SDCBP-206	ENST00000519115	KRTAP10-1	P60331	282 aa		4.96	□□□□□ -1.62
SDCBP-206	ENST00000519115	SNHG12	Q9BXW3	62 aa		4.96	□□□□□ -1.62
SDCBP-206	ENST00000519115	TTTY13	Q9BZ97	58 aa		4.96	□□□□□ -1.62
SDCBP-206	ENST00000519115	USP17L23	D6RBM5	183 aa		4.95	□□□□□ -1.62
SDCBP-206	ENST00000519115	TLX1NB	P0CAT3	122 aa		4.95	□□□□□ -1.62
SDCBP-206	ENST00000519115	SPAG11B	Q08648	103 aa		4.95	□□□□□ -1.62
SDCBP-206	ENST00000519115	TOMM7	Q9P0U1	55 aa		4.95	□□□□□ -1.62
SDCBP-206	ENST00000519115	CDK2AP2	O75956	126 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	NDUFC2	O95298	119 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	SMIM13	P0DJ93	91 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	CNBP	P62633	177 aa	Known RBP	4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	HAMP	P81172	84 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	LINC01620	Q4KN68	170 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	C15orf56	Q8N910	161 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115	ERG28	Q9UKR5	140 aa		4.94	□□□□□ -1.62
SDCBP-206	ENST00000519115		A0A0B4J2C4	111 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	HINT1	P49773	126 aa	Predicted RBP	4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	ADAMTSL4-AS1	Q5T5F5	129 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	MUSTN1	Q8IVN3	82 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	LINC00308	Q8TCZ7	52 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	KRTAP9-9	Q9BYP9	154 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	KRTAP9-4	Q9BYQ2	154 aa		4.93	□□□□□ -1.62
SDCBP-206	ENST00000519115	HERC1	Q15751	4861 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	NDUFC2-KCTD14	E9PQ53	114 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	LINC00158	P58513	81 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	SYCN	Q0VAF6	134 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	CAMK2N2	Q96S95	79 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	LRP1B	Q9NZR2	4599 aa		4.92	□□□□□ -1.62
SDCBP-206	ENST00000519115	TRAV13-2	A0A0B4J235	113 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	FXYD2	P54710	66 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	C2orf82	Q6UX34	121 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	FAM30A	Q9NZY2	134 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	PRO1854	Q9UHT4	67 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	PLA2G2D	Q9UNK4	145 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	CBY1	Q9Y3M2	126 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	DNAH5	Q8TE73	4624 aa		4.91	□□□□□ -1.62
SDCBP-206	ENST00000519115	TRBV10-2	A0A0K0K1G8	114 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115		A4D1N5	150 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	CFC1B	P0CG36	223 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	CFC1	P0CG37	223 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	XG	P55808	180 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	HIGD2B	Q4VC39	106 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	MIR7-3HG	Q8N6C7	128 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	KRTAP4-5	Q9BYR2	181 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	C6orf48	Q9UBA6	75 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	HSPG2	P98160	4391 aa		4.9	□□□□□ -1.63
SDCBP-206	ENST00000519115	C9orf118	A6NHY6	69 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	C10orf25	Q5T742	122 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	KRTAP19-1	Q8IUB9	90 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	CARD19	Q96LW7	228 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	SND1-IT1	Q9HBX3	110 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	LINC00474	Q9P2X8	69 aa		4.89	□□□□□ -1.63
SDCBP-206	ENST00000519115	APOB	P04114	4563 aa	Known RBP	4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	KRTAP4-8	A0A0G2JLE6	195 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	TAX1BP3	O14907	124 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	PFN2	P35080	140 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	LYRM7	Q5U5X0	104 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115		Q6ZRU5	148 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	C9orf163	Q8N9P6	203 aa		4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	NHP2	Q9NX24	153 aa	Known RBP	4.88	□□□□□ -1.63
SDCBP-206	ENST00000519115	LOC107984640	A0A0U1RRK4	108 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	SMR3B	P02814	79 aa	Predicted RBP	4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	SLPI	P03973	132 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	BATF	Q16520	125 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	SOSTDC1	Q6X4U4	206 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115		Q6ZSA8	131 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115		Q8N1X5	172 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	RAB37	Q96AX2	223 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	LINC00526	Q96FQ7	95 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	TMEM126A	Q9H061	195 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	MUC2	Q02817	5179 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	ABCA13	Q86UQ4	5058 aa		4.87	□□□□□ -1.63
SDCBP-206	ENST00000519115	IGLV5-37	A0A075B6J1	123 aa		4.86	□□□□□ -1.63
SDCBP-206	ENST00000519115	TRBV20-1	A0A075B6N2	111 aa		4.86	□□□□□ -1.63
SDCBP-206	ENST00000519115	COX6C	P09669	75 aa		4.86	□□□□□ -1.63
SDCBP-206	ENST00000519115	SCX	Q7RTU7	201 aa		4.86	□□□□□ -1.63
SDCBP-206	ENST00000519115	C9orf116	Q5BN46	136 aa	Predicted RBP	4.85	□□□□□ -1.63
SDCBP-206	ENST00000519115	DAND5	Q8N907	189 aa		4.85	□□□□□ -1.63
SDCBP-206	ENST00000519115	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.85	□□□□□ -1.63
SDCBP-206	ENST00000519115	TRBV7-6	A0A0J9YX20	115 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115		A0A0U1RRA0	63 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	EPM2A	B3EWF7	344 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115		H0YGX0	51 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	PANO1	I0J062	215 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	CHTF8	P0CG12	524 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	FABP2	P12104	132 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	RPL28	P46779	137 aa	Known RBP	4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115		Q5VSD8	79 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115		Q6ZRP5	223 aa		4.84	□□□□□ -1.63
SDCBP-206	ENST00000519115	IGKV2-28	A0A075B6P5	120 aa		4.83	□□□□□ -1.64
SDCBP-206	ENST00000519115		A0A1W2PPM0	123 aa		4.83	□□□□□ -1.64

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