RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 IGLV5-52A0A0A0MRZ9 124 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-206ENST00000519115 A0A1B0GWB2 263 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 BVES-AS1Q5T3Y7 98 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 Q8N814 137 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 PKIGQ9Y2B9 76 aa4.97□□□□□ -1.61
SDCBP-206ENST00000519115 DYNC1H1Q14204 4646 aaKnown RBP4.96□□□□□ -1.61
SDCBP-206ENST00000519115 KRTAP10-1P60331 282 aa4.96□□□□□ -1.62
SDCBP-206ENST00000519115 SNHG12Q9BXW3 62 aa4.96□□□□□ -1.62
SDCBP-206ENST00000519115 TTTY13Q9BZ97 58 aa4.96□□□□□ -1.62
SDCBP-206ENST00000519115 USP17L23D6RBM5 183 aa4.95□□□□□ -1.62
SDCBP-206ENST00000519115 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
SDCBP-206ENST00000519115 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
SDCBP-206ENST00000519115 TOMM7Q9P0U1 55 aa4.95□□□□□ -1.62
SDCBP-206ENST00000519115 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 NDUFC2O95298 119 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 SMIM13P0DJ93 91 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
SDCBP-206ENST00000519115 HAMPP81172 84 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 LINC01620Q4KN68 170 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 C15orf56Q8N910 161 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 ERG28Q9UKR5 140 aa4.94□□□□□ -1.62
SDCBP-206ENST00000519115 A0A0B4J2C4 111 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 HINT1P49773 126 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-206ENST00000519115 ADAMTSL4-AS1Q5T5F5 129 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 MUSTN1Q8IVN3 82 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 LINC00308Q8TCZ7 52 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SDCBP-206ENST00000519115 HERC1Q15751 4861 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 NDUFC2-KCTD14E9PQ53 114 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 LINC00158P58513 81 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 SYCNQ0VAF6 134 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 CAMK2N2Q96S95 79 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 LRP1BQ9NZR2 4599 aa4.92□□□□□ -1.62
SDCBP-206ENST00000519115 TRAV13-2A0A0B4J235 113 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 FXYD2P54710 66 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 C2orf82Q6UX34 121 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 UNQ6190/PRO20217Q6UXQ8 127 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 PLA2G2DQ9UNK4 145 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 CBY1Q9Y3M2 126 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 DNAH5Q8TE73 4624 aa4.91□□□□□ -1.62
SDCBP-206ENST00000519115 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 A4D1N5 150 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 CFC1BP0CG36 223 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 CFC1P0CG37 223 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 XGP55808 180 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 HIGD2BQ4VC39 106 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 MIR7-3HGQ8N6C7 128 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 HSPG2P98160 4391 aa4.9□□□□□ -1.63
SDCBP-206ENST00000519115 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 C10orf25Q5T742 122 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
SDCBP-206ENST00000519115 APOBP04114 4563 aaKnown RBP4.88□□□□□ -1.63
SDCBP-206ENST00000519115 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 TAX1BP3O14907 124 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 PFN2P35080 140 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 Q6ZRU5 148 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 C9orf163Q8N9P6 203 aa4.88□□□□□ -1.63
SDCBP-206ENST00000519115 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
SDCBP-206ENST00000519115 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 SMR3BP02814 79 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-206ENST00000519115 SLPIP03973 132 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 BATFQ16520 125 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 Q6ZSA8 131 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 Q8N1X5 172 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 TMEM126AQ9H061 195 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 MUC2Q02817 5179 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
SDCBP-206ENST00000519115 IGLV5-37A0A075B6J1 123 aa4.86□□□□□ -1.63
SDCBP-206ENST00000519115 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
SDCBP-206ENST00000519115 COX6CP09669 75 aa4.86□□□□□ -1.63
SDCBP-206ENST00000519115 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
SDCBP-206ENST00000519115 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-206ENST00000519115 DAND5Q8N907 189 aa4.85□□□□□ -1.63
SDCBP-206ENST00000519115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-206ENST00000519115 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 EPM2AB3EWF7 344 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 H0YGX0 51 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 PANO1I0J062 215 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 CHTF8P0CG12 524 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 FABP2P12104 132 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 RPL28P46779 137 aaKnown RBP4.84□□□□□ -1.63
SDCBP-206ENST00000519115 Q5VSD8 79 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 Q6ZRP5 223 aa4.84□□□□□ -1.63
SDCBP-206ENST00000519115 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
SDCBP-206ENST00000519115 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms