RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-203ENST00000517921 Q6ZRP5 223 aa6.83□□□□□ -1.32
PABPC1-203ENST00000517921 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
PABPC1-203ENST00000517921 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
PABPC1-203ENST00000517921 A4D1N5 150 aa6.82□□□□□ -1.32
PABPC1-203ENST00000517921 RPL24P83731 157 aaKnown RBP6.82□□□□□ -1.32
PABPC1-203ENST00000517921 BATFQ16520 125 aa6.82□□□□□ -1.32
PABPC1-203ENST00000517921 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
PABPC1-203ENST00000517921 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
PABPC1-203ENST00000517921 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
PABPC1-203ENST00000517921 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
PABPC1-203ENST00000517921 A6NJY4 79 aa6.81□□□□□ -1.32
PABPC1-203ENST00000517921 RPL18AQ02543 176 aaKnown RBP6.81□□□□□ -1.32
PABPC1-203ENST00000517921 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
PABPC1-203ENST00000517921 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
PABPC1-203ENST00000517921 GAGE2EQ4V326 116 aa6.8□□□□□ -1.32
PABPC1-203ENST00000517921 Q8NDZ9 215 aa6.8□□□□□ -1.32
PABPC1-203ENST00000517921 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
PABPC1-203ENST00000517921 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
PABPC1-203ENST00000517921 GAGE2DQ9UEU5 116 aa6.8□□□□□ -1.32
PABPC1-203ENST00000517921 A0A1B0GWB2 263 aa6.79□□□□□ -1.32
PABPC1-203ENST00000517921 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
PABPC1-203ENST00000517921 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
PABPC1-203ENST00000517921 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
PABPC1-203ENST00000517921 DNAH8Q96JB1 4490 aa6.79□□□□□ -1.32
PABPC1-203ENST00000517921 A0A096LNI7 61 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 A6NDN8 102 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 K7ERJ3 54 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 CFC1P0CG37 223 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 GAGE2BQ13066 116 aa6.78□□□□□ -1.32
PABPC1-203ENST00000517921 IGKV2-28A0A075B6P5 120 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 C16orf90A8MZG2 172 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 NDUFC2O95298 119 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 IGKV2D-28P01615 120 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
PABPC1-203ENST00000517921 J3QL48 77 aa6.76□□□□□ -1.33
PABPC1-203ENST00000517921 VPREB1P12018 145 aa6.76□□□□□ -1.33
PABPC1-203ENST00000517921 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
PABPC1-203ENST00000517921 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
PABPC1-203ENST00000517921 NCR3O14931 201 aa6.75□□□□□ -1.33
PABPC1-203ENST00000517921 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
PABPC1-203ENST00000517921 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
PABPC1-203ENST00000517921 DYNC1H1Q14204 4646 aaKnown RBP6.75□□□□□ -1.33
PABPC1-203ENST00000517921 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
PABPC1-203ENST00000517921 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
PABPC1-203ENST00000517921 PRR3P79522 188 aaKnown RBP6.74□□□□□ -1.33
PABPC1-203ENST00000517921 SERTAD4-AS1Q5TG53 156 aa6.74□□□□□ -1.33
PABPC1-203ENST00000517921 LINC00337Q8N6G1 96 aa6.74□□□□□ -1.33
PABPC1-203ENST00000517921 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
PABPC1-203ENST00000517921 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
PABPC1-203ENST00000517921 PANO1I0J062 215 aa6.73□□□□□ -1.33
PABPC1-203ENST00000517921 TAX1BP3O14907 124 aa6.73□□□□□ -1.33
PABPC1-203ENST00000517921 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
PABPC1-203ENST00000517921 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
PABPC1-203ENST00000517921 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
PABPC1-203ENST00000517921 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 TRAV13-2A0A0B4J235 113 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-203ENST00000517921 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
PABPC1-203ENST00000517921 A0A1W2PNN7 141 aa6.71□□□□□ -1.34
PABPC1-203ENST00000517921 TSPAN13O95857 204 aa6.71□□□□□ -1.34
PABPC1-203ENST00000517921 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-203ENST00000517921 LINC00474Q9P2X8 69 aa6.71□□□□□ -1.34
PABPC1-203ENST00000517921 M0R378 163 aa6.7□□□□□ -1.34
PABPC1-203ENST00000517921 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
PABPC1-203ENST00000517921 H7C2G1 150 aa6.69□□□□□ -1.34
PABPC1-203ENST00000517921 OR13C6PQ8NH95 151 aa6.69□□□□□ -1.34
PABPC1-203ENST00000517921 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
PABPC1-203ENST00000517921 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
PABPC1-203ENST00000517921 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 M0QXV9 152 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 IGLV6-57P01721 117 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 Q1RN00 199 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 C7orf33Q8WU49 177 aa6.68□□□□□ -1.34
PABPC1-203ENST00000517921 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
PABPC1-203ENST00000517921 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
PABPC1-203ENST00000517921 H3BUT2 72 aa6.67□□□□□ -1.34
PABPC1-203ENST00000517921 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
PABPC1-203ENST00000517921 MRPL55Q7Z7F7 128 aaKnown RBP6.67□□□□□ -1.34
PABPC1-203ENST00000517921 SMIM11BQ8TCY0 68 aa6.67□□□□□ -1.34
PABPC1-203ENST00000517921 TMEM126AQ9H061 195 aa6.67□□□□□ -1.34
PABPC1-203ENST00000517921 A0A087WYN8 130 aa6.66□□□□□ -1.34
PABPC1-203ENST00000517921 GAGE10A6NGK3 116 aa6.66□□□□□ -1.34
PABPC1-203ENST00000517921 Q6ZSA8 131 aa6.66□□□□□ -1.34
PABPC1-203ENST00000517921 LINC00167Q96N53 147 aa6.66□□□□□ -1.34
PABPC1-203ENST00000517921 FAM30AQ9NZY2 134 aa6.66□□□□□ -1.34
PABPC1-203ENST00000517921 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.34
PABPC1-203ENST00000517921 TRIAP1O43715 76 aa6.65□□□□□ -1.34
PABPC1-203ENST00000517921 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
PABPC1-203ENST00000517921 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
PABPC1-203ENST00000517921 A0A1W2PPM0 123 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms