RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 COA5Q86WW8 74 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 MAFIPQ8WZ33 124 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
CPNE3-204ENST00000517862 NIT2Q9NQR4 276 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 NHP2Q9NX24 153 aaKnown RBP1.31□□□□□ -2.2
CPNE3-204ENST00000517862 A8MWV9 139 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 TMEM262E9PQX1 116 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 HIST1H2BKO60814 126 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 SPINK1P00995 79 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 HIST1H2BJP06899 126 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 SDC2P34741 201 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 MPV17LQ2QL34 196 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 LINC01590Q5TEZ4 76 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 TMEM229BQ8NBD8 167 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 OR10AC1Q8NH08 325 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 TMEM138Q9NPI0 162 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 GSKIPQ9P0R6 139 aa1.3□□□□□ -2.2
CPNE3-204ENST00000517862 J3KT08 172 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 FAM107AO95990 144 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 TRAPPC2P0DI81 140 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 TRAPPC2BP0DI82 140 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 SCGB1A1P11684 91 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 RPL35P42766 123 aaKnown RBP1.29□□□□□ -2.2
CPNE3-204ENST00000517862 ROMO1P60602 79 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 RAB4BP61018 213 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 QRFPP83859 136 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 RHOHQ15669 191 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 LINC00305Q7Z4B0 112 aa1.29□□□□□ -2.2
CPNE3-204ENST00000517862 IGHV1-58A0A0C4DH39 117 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 LOC107984640A0A0U1RRK4 108 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 CD2P06729 351 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 GPX1P07203 203 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 AKR1C3P42330 323 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 RAB5CP51148 216 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 POLR2JP52435 117 aaKnown RBP1.28□□□□□ -2.2
CPNE3-204ENST00000517862 NDUFA6P56556 154 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 DNAJB13P59910 316 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 BRK1Q8WUW1 75 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 SFT2D1Q8WV19 159 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 GGACTQ9BVM4 153 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 R4GMQ9 66 aa1.28□□□□□ -2.2
CPNE3-204ENST00000517862 TRAV12-1A0A0B4J245 112 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 TRBV6-5A0A0K0K1A5 114 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 H3BMG7 143 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 MT-ND4LP03901 98 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 CKS1BP61024 79 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
CPNE3-204ENST00000517862 KRTAP13-1Q8IUC0 172 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 OR5H6Q8NGV6 325 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 LSM10Q969L4 123 aaKnown RBP1.27□□□□□ -2.21
CPNE3-204ENST00000517862 RAB37Q96AX2 223 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 CGREF1Q99674 301 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 C14orf132Q9NPU4 83 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 FKBP11Q9NYL4 201 aa1.27□□□□□ -2.21
CPNE3-204ENST00000517862 TRAV13-1A0A0B4J241 112 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 FAM24AA6NFZ4 105 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 FOXA3P55318 350 aaPredicted RBP1.26□□□□□ -2.21
CPNE3-204ENST00000517862 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 OR8I2Q8N0Y5 310 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 LINC00269Q8N2A0 174 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 OR5D14Q8NGL3 314 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 FAM107BQ9H098 131 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 BET1LQ9NYM9 111 aa1.26□□□□□ -2.21
CPNE3-204ENST00000517862 TRBV6-8A0A0A6YYG3 113 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TRBV6-4A0A1B0GX49 114 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 CCDC160A6NGH7 325 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 C9JAW5 83 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 PDE6HQ13956 83 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 SMCO1Q147U7 214 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 CCDC153Q494R4 210 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TMEM244Q5VVB8 128 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 Q5XG85 94 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TEX261Q6UWH6 196 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TMEM14EPQ6UXP3 125 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TMEM254Q8TBM7 123 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 ZNF431Q8TF32 576 aaPredicted RBP1.25□□□□□ -2.21
CPNE3-204ENST00000517862 HYLS1Q96M11 299 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 PRELID3AQ96N28 172 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 OR5AC2Q9NZP5 309 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 HIGD1AQ9Y241 93 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 U3KQ87 197 aa1.25□□□□□ -2.21
CPNE3-204ENST00000517862 TRBV27A0A0K0K1C4 114 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 A0A1B0GX51 115 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 hDV103S1A0JD37 113 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 CRYM-AS1A6NIL9 109 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 C17orf112F2Z3M2 114 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 ZNF93P35789 620 aaPredicted RBP1.24□□□□□ -2.21
CPNE3-204ENST00000517862 KRTAP12-3P60328 96 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 OR51A4Q8NGJ6 313 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 S100A13Q99584 98 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 NDUFA4L2Q9NRX3 87 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 HSPB8Q9UJY1 196 aa1.24□□□□□ -2.21
CPNE3-204ENST00000517862 TRAV30A0A087WSZ9 112 aa1.23□□□□□ -2.21
CPNE3-204ENST00000517862 GVQW2A0A096LPI5 108 aaPredicted RBP1.23□□□□□ -2.21
CPNE3-204ENST00000517862 NUPR1O60356 82 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms