RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 PET117Q6UWS5 81 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 LINC00469Q8N7U9 141 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
PDGFRB-203ENST00000517660 F8VRH5 84 aa6.43□□□□□ -1.38
PDGFRB-203ENST00000517660 H0Y8G0 127 aa6.43□□□□□ -1.38
PDGFRB-203ENST00000517660 CXCL5P42830 114 aa6.43□□□□□ -1.38
PDGFRB-203ENST00000517660 ATOH7Q8N100 152 aa6.43□□□□□ -1.38
PDGFRB-203ENST00000517660 CST9LQ9H4G1 147 aa6.43□□□□□ -1.38
PDGFRB-203ENST00000517660 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
PDGFRB-203ENST00000517660 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
PDGFRB-203ENST00000517660 SMIM1B2RUZ4 78 aa6.42□□□□□ -1.38
PDGFRB-203ENST00000517660 HSBP1L1C9JCN9 74 aa6.42□□□□□ -1.38
PDGFRB-203ENST00000517660 PMVKQ15126 192 aa6.42□□□□□ -1.38
PDGFRB-203ENST00000517660 H0Y9J4 135 aa6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 XAGE1AQ9HD64 81 aa6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 C22orf24Q9Y442 160 aa6.41□□□□□ -1.38
PDGFRB-203ENST00000517660 A0A096LNJ9 63 aa6.4□□□□□ -1.38
PDGFRB-203ENST00000517660 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
PDGFRB-203ENST00000517660 IFI27L1Q96BM0 104 aa6.4□□□□□ -1.38
PDGFRB-203ENST00000517660 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
PDGFRB-203ENST00000517660 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
PDGFRB-203ENST00000517660 H3BRM9 83 aa6.39□□□□□ -1.39
PDGFRB-203ENST00000517660 SPINK8P0C7L1 97 aa6.39□□□□□ -1.39
PDGFRB-203ENST00000517660 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
PDGFRB-203ENST00000517660 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
PDGFRB-203ENST00000517660 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
PDGFRB-203ENST00000517660 IGLV1-50A0A075B6I6 118 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 ZNF861PO60384 105 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 ATP5LO75964 103 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 CTAG1AP78358 180 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 PMCHL2Q9BQD1 86 aa6.37□□□□□ -1.39
PDGFRB-203ENST00000517660 M0R143 59 aa6.36□□□□□ -1.39
PDGFRB-203ENST00000517660 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
PDGFRB-203ENST00000517660 IGLV5-39A0A0G2JS06 123 aa6.35□□□□□ -1.39
PDGFRB-203ENST00000517660 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
PDGFRB-203ENST00000517660 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.39
PDGFRB-203ENST00000517660 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
PDGFRB-203ENST00000517660 IGLV5-37A0A075B6J1 123 aa6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 BCE1O60756 84 aa6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 RPL13AP40429 203 aaKnown RBP6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 BATFQ16520 125 aa6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 SLC25A34Q6PIV7 304 aa6.33□□□□□ -1.4
PDGFRB-203ENST00000517660 GAGE10A6NGK3 116 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 RPL37AP8A6NKH3 93 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 DPM2O94777 84 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 PFN2P35080 140 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
PDGFRB-203ENST00000517660 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 IGKCP01834 107 aa6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 COX17Q14061 63 aa6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 TMEM170BQ5T4T1 132 aa6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
PDGFRB-203ENST00000517660 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 COX8AP10176 69 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 PLNP26678 52 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
PDGFRB-203ENST00000517660 NMUP48645 174 aa6.29□□□□□ -1.4
PDGFRB-203ENST00000517660 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
PDGFRB-203ENST00000517660 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
PDGFRB-203ENST00000517660 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
PDGFRB-203ENST00000517660 A0A1B0GV90 55 aa6.27□□□□□ -1.41
PDGFRB-203ENST00000517660 VPREB1P12018 145 aa6.27□□□□□ -1.41
PDGFRB-203ENST00000517660 UBE2AP49459 152 aa6.27□□□□□ -1.41
PDGFRB-203ENST00000517660 HINT1P49773 126 aaPredicted RBP6.27□□□□□ -1.41
PDGFRB-203ENST00000517660 COL5A1-AS1Q5SY13 56 aa6.27□□□□□ -1.41
PDGFRB-203ENST00000517660 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 CRYGAP11844 174 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 LINC00158P58513 81 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 KRTAP13-1Q8IUC0 172 aa6.26□□□□□ -1.41
PDGFRB-203ENST00000517660 DLEU1O43261 78 aa6.25□□□□□ -1.41
PDGFRB-203ENST00000517660 HERVK_113P61574 105 aa6.25□□□□□ -1.41
PDGFRB-203ENST00000517660 BOD1L2Q8IYS8 172 aa6.25□□□□□ -1.41
PDGFRB-203ENST00000517660 A0A087X002 238 aa6.24□□□□□ -1.41
PDGFRB-203ENST00000517660 C2orf91Q6ZV80 131 aa6.24□□□□□ -1.41
PDGFRB-203ENST00000517660 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
PDGFRB-203ENST00000517660 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
PDGFRB-203ENST00000517660 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
PDGFRB-203ENST00000517660 Q8NDZ9 215 aa6.23□□□□□ -1.41
PDGFRB-203ENST00000517660 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
PDGFRB-203ENST00000517660 TMEM126AQ9H061 195 aa6.23□□□□□ -1.41
PDGFRB-203ENST00000517660 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
PDGFRB-203ENST00000517660 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 TMEM238C9JI98 176 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 M0R378 163 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 TSPAN13O95857 204 aa6.22□□□□□ -1.41
PDGFRB-203ENST00000517660 HSD52Q0P140 79 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms