RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ESRGQ1W209 222 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 LINC00336Q6ZUF6 198 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
CPNE3-203ENST00000517490 ELOF1P60002 83 aaKnown RBP4.56□□□□□ -1.68
CPNE3-203ENST00000517490 H7BZZ5 65 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 C10orf25Q5T742 122 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 TM2D3Q9BRN9 247 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 CELA1Q9UNI1 258 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
CPNE3-203ENST00000517490 CSNK1G2-AS1Q8NCQ2 148 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 PRB2P02812 416 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-203ENST00000517490 C1orf137Q5JT78 98 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-203ENST00000517490 A0A1B0GW54 56 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 KPRPQ5T749 579 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-203ENST00000517490 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
CPNE3-203ENST00000517490 LYPD5Q6UWN5 251 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 Q8N9L7 120 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 C6orf48Q9UBA6 75 aa4.54□□□□□ -1.68
CPNE3-203ENST00000517490 SPTBN5Q9NRC6 3674 aaKnown RBP4.53□□□□□ -1.68
CPNE3-203ENST00000517490 A0A096LNT2 108 aa4.53□□□□□ -1.68
CPNE3-203ENST00000517490 HIVEP2P31629 2446 aa4.52□□□□□ -1.69
CPNE3-203ENST00000517490 FRYQ5TBA9 3013 aa4.52□□□□□ -1.69
CPNE3-203ENST00000517490 FRYLO94915 3013 aa4.52□□□□□ -1.69
CPNE3-203ENST00000517490 HIGD2AQ9BW72 106 aa4.52□□□□□ -1.69
CPNE3-203ENST00000517490 Q6ZRU5 148 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 SPEGQ15772 3267 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 TRBV7-4A0A0J9YYF1 115 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 LINC00612Q8N6U2 182 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 TLN2Q9Y4G6 2542 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 F8P00451 2351 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
CPNE3-203ENST00000517490 WFDC10BQ8IUB3 73 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 FN1P02751 2386 aaKnown RBP4.5□□□□□ -1.69
CPNE3-203ENST00000517490 PRR4Q16378 134 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 SMIM29Q86T20 159 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 MGAQ8IWI9 3026 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 CASC2Q6XLA1 102 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 C19orf73Q9NVV2 129 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 IGLV9-49A0A0B4J1Y8 123 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 C11orf45Q8TAV5 145 aa4.5□□□□□ -1.69
CPNE3-203ENST00000517490 SPTSSBQ8NFR3 76 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 WDFY4Q6ZS81 3184 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 Q5XG85 94 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 CHD8Q9HCK8 2581 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 SETD2Q9BYW2 2564 aaPredicted RBP4.49□□□□□ -1.69
CPNE3-203ENST00000517490 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
CPNE3-203ENST00000517490 H0Y9J4 135 aa4.48□□□□□ -1.69
CPNE3-203ENST00000517490 ABCA2Q9BZC7 2435 aa4.48□□□□□ -1.69
CPNE3-203ENST00000517490 ANKRD17O75179 2603 aaKnown RBP4.48□□□□□ -1.69
CPNE3-203ENST00000517490 LINC00474Q9P2X8 69 aa4.48□□□□□ -1.69
CPNE3-203ENST00000517490 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
CPNE3-203ENST00000517490 M0R2N4 97 aa4.47□□□□□ -1.69
CPNE3-203ENST00000517490 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
CPNE3-203ENST00000517490 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
CPNE3-203ENST00000517490 PRR34Q9NV39 138 aa4.47□□□□□ -1.69
CPNE3-203ENST00000517490 PSPHP1O15172 72 aa4.46□□□□□ -1.69
CPNE3-203ENST00000517490 IGKV4-1P06312 121 aa4.46□□□□□ -1.69
CPNE3-203ENST00000517490 C14orf177Q52M58 125 aa4.46□□□□□ -1.69
CPNE3-203ENST00000517490 Q8NBF4 154 aa4.46□□□□□ -1.69
CPNE3-203ENST00000517490 ABCA12Q86UK0 2595 aa4.46□□□□□ -1.7
CPNE3-203ENST00000517490 hDV103S1A0JD37 113 aa4.46□□□□□ -1.7
CPNE3-203ENST00000517490 B9D2Q9BPU9 175 aa4.46□□□□□ -1.7
CPNE3-203ENST00000517490 POLQO75417 2590 aa4.46□□□□□ -1.7
CPNE3-203ENST00000517490 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
CPNE3-203ENST00000517490 JMJD1CQ15652 2540 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 SPTBN4Q9H254 2564 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 ZNF292O60281 2723 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 H3BNG1 76 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 OXTP01178 125 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 PIEZO1Q92508 2521 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 Q6ZRX8 168 aa4.45□□□□□ -1.7
CPNE3-203ENST00000517490 Q8NAQ8 132 aa4.44□□□□□ -1.7
CPNE3-203ENST00000517490 USP34Q70CQ2 3546 aa4.44□□□□□ -1.7
CPNE3-203ENST00000517490 Q6ZTC4 211 aa4.44□□□□□ -1.7
CPNE3-203ENST00000517490 FREM2Q5SZK8 3169 aa4.44□□□□□ -1.7
CPNE3-203ENST00000517490 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
CPNE3-203ENST00000517490 KCNQ1DNQ9H478 68 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 A0A087WSZ3 146 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 H0Y9P7 68 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 LRRK2Q5S007 2527 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 AKAP13Q12802 2813 aa4.43□□□□□ -1.7
CPNE3-203ENST00000517490 Q6ZRP5 223 aa4.42□□□□□ -1.7
CPNE3-203ENST00000517490 INAFM1C9JVW0 142 aa4.42□□□□□ -1.7
CPNE3-203ENST00000517490 MYO15AQ9UKN7 3530 aa4.42□□□□□ -1.7
CPNE3-203ENST00000517490 H3BPC8 53 aa4.42□□□□□ -1.7
CPNE3-203ENST00000517490 OCR1Q9BZK8 76 aa4.42□□□□□ -1.7
CPNE3-203ENST00000517490 PKD1L2Q7Z442 2459 aa4.41□□□□□ -1.7
CPNE3-203ENST00000517490 A0A096LNI7 61 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms