RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 PMCHL1Q16048 86 aa5.02□□□□□ -1.61
PABPC1-202ENST00000517403 C6orf226Q5I0X4 101 aa5.02□□□□□ -1.61
PABPC1-202ENST00000517403 SCGB3A1Q96QR1 104 aa5.02□□□□□ -1.61
PABPC1-202ENST00000517403 TP73-AS1Q9UF72 201 aa5.02□□□□□ -1.61
PABPC1-202ENST00000517403 TINCRA0A1B0GVN0 87 aa5.01□□□□□ -1.61
PABPC1-202ENST00000517403 TMEM238C9JI98 176 aa5.01□□□□□ -1.61
PABPC1-202ENST00000517403 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-202ENST00000517403 RAB5BP61020 215 aa5.01□□□□□ -1.61
PABPC1-202ENST00000517403 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
PABPC1-202ENST00000517403 K7EMI3 77 aa5□□□□□ -1.61
PABPC1-202ENST00000517403 NUPR1O60356 82 aa5□□□□□ -1.61
PABPC1-202ENST00000517403 IGKV2D-28P01615 120 aa5□□□□□ -1.61
PABPC1-202ENST00000517403 PDZD11Q5EBL8 140 aa5□□□□□ -1.61
PABPC1-202ENST00000517403 GEMIN7Q9H840 131 aaKnown RBP5□□□□□ -1.61
PABPC1-202ENST00000517403 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 M0R378 163 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 IGLC3P0DOY3 106 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 C10orf91Q5T1B1 145 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 C3orf22Q8N5N4 141 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 CARHSP1Q9Y2V2 147 aaKnown RBP4.99□□□□□ -1.61
PABPC1-202ENST00000517403 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
PABPC1-202ENST00000517403 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 PFN2P35080 140 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
PABPC1-202ENST00000517403 CXCL5P42830 114 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 C18orf32Q8TCD1 76 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
PABPC1-202ENST00000517403 GNB1LQ9BYB4 327 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 SND1-IT1Q9HBX3 110 aa4.98□□□□□ -1.61
PABPC1-202ENST00000517403 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 PMVKQ15126 192 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 COMMD7Q86VX2 200 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 YPEL4Q96NS1 127 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
PABPC1-202ENST00000517403 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
PABPC1-202ENST00000517403 SEC11AP67812 179 aa4.96□□□□□ -1.62
PABPC1-202ENST00000517403 UQCC3Q6UW78 93 aa4.96□□□□□ -1.62
PABPC1-202ENST00000517403 TYMSOSQ8TAI1 123 aa4.96□□□□□ -1.62
PABPC1-202ENST00000517403 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
PABPC1-202ENST00000517403 TMEM126AQ9H061 195 aa4.96□□□□□ -1.62
PABPC1-202ENST00000517403 CRYGAP11844 174 aa4.95□□□□□ -1.62
PABPC1-202ENST00000517403 RAB14P61106 215 aa4.95□□□□□ -1.62
PABPC1-202ENST00000517403 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
PABPC1-202ENST00000517403 FABP9Q0Z7S8 132 aa4.94□□□□□ -1.62
PABPC1-202ENST00000517403 FA2HQ7L5A8 372 aa4.94□□□□□ -1.62
PABPC1-202ENST00000517403 UBE2AP49459 152 aa4.93□□□□□ -1.62
PABPC1-202ENST00000517403 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
PABPC1-202ENST00000517403 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
PABPC1-202ENST00000517403 RPS10P5Q9NQ39 176 aa4.93□□□□□ -1.62
PABPC1-202ENST00000517403 ATP5LO75964 103 aa4.92□□□□□ -1.62
PABPC1-202ENST00000517403 NDUFA6P56556 154 aa4.92□□□□□ -1.62
PABPC1-202ENST00000517403 FAM19A1Q7Z5A9 133 aa4.92□□□□□ -1.62
PABPC1-202ENST00000517403 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
PABPC1-202ENST00000517403 NKAPP1Q8N9T2 125 aa4.92□□□□□ -1.62
PABPC1-202ENST00000517403 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
PABPC1-202ENST00000517403 HBDP02042 147 aa4.91□□□□□ -1.62
PABPC1-202ENST00000517403 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
PABPC1-202ENST00000517403 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
PABPC1-202ENST00000517403 TMEM223A0PJW6 202 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 LINC00614P0C842 121 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 S100PP25815 95 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 RHEBQ15382 184 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 DAND5Q8N907 189 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 SPRR4Q96PI1 79 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 SMCO4Q9NRQ5 59 aa4.9□□□□□ -1.63
PABPC1-202ENST00000517403 NCR3O14931 201 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 ERC2-IT1O76042 136 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 SPRR1AP35321 89 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 HIGD2AQ9BW72 106 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 TRAPPC1Q9Y5R8 145 aa4.89□□□□□ -1.63
PABPC1-202ENST00000517403 IGLV7-46A0A075B6I9 117 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 H3BRM9 83 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 SMIM13P0DJ93 91 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 G0S2P27469 103 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 Q6ZVQ6 151 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 SMCR5Q8TEV8 140 aa4.88□□□□□ -1.63
PABPC1-202ENST00000517403 H0Y8G0 127 aa4.87□□□□□ -1.63
PABPC1-202ENST00000517403 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
PABPC1-202ENST00000517403 CBLN2Q8IUK8 224 aa4.87□□□□□ -1.63
PABPC1-202ENST00000517403 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
PABPC1-202ENST00000517403 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
PABPC1-202ENST00000517403 TRBV10-3A0A0K0K1G6 114 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 APOC3P02656 99 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 COX17Q14061 63 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 COX19Q49B96 90 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 Q8NBF4 154 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 Q9BRP9 147 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
PABPC1-202ENST00000517403 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
PABPC1-202ENST00000517403 LINC00158P58513 81 aa4.85□□□□□ -1.63
PABPC1-202ENST00000517403 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
PABPC1-202ENST00000517403 IFI27L1Q96BM0 104 aa4.85□□□□□ -1.63
PABPC1-202ENST00000517403 TRAV12-1A0A0B4J245 112 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms