RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 IGHV3-53P01767 116 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 PRB2P02812 416 aaPredicted RBP2.39□□□□□ -2.03
HERC6-208ENST00000515365 P0DMU3 169 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 FAM231AP0DMU4 169 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 FAM231CP0DMU5 169 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 IFITM1P13164 125 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 FXYD2P54710 66 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 TCTAP57738 103 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 PRB3Q04118 309 aaPredicted RBP2.39□□□□□ -2.03
HERC6-208ENST00000515365 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 PRR9Q5T870 116 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 COPS9Q8WXC6 57 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 SPCS1Q9Y6A9 102 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 DNAH10Q8IVF4 4471 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 TRBV30A0A0K0K1B3 111 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 TINCRA0A1B0GVN0 87 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 LRCOL1A6NCL2 159 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 TMEM262E9PQX1 116 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 MORN3Q6PF18 240 aaPredicted RBP2.38□□□□□ -2.03
HERC6-208ENST00000515365 NDUFA11Q86Y39 141 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 C4orf3Q8WVX3 66 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 PRADC1Q9BSG0 188 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 GTSF1LQ9H1H1 148 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 C16orf95Q9H693 158 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 SND1-IT1Q9HBX3 110 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 PRO1854Q9UHT4 67 aa2.38□□□□□ -2.03
HERC6-208ENST00000515365 DYNC1H1Q14204 4646 aaKnown RBP2.38□□□□□ -2.03
HERC6-208ENST00000515365 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
HERC6-208ENST00000515365 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 J3QQQ9 107 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 IGHV3-30P01768 117 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 IGHV3-30-5P0DP03 117 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
HERC6-208ENST00000515365 MOBPQ13875 183 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 COTL1Q14019 142 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 DEFB114Q30KQ6 69 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 CFAP126Q5VTH2 177 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 SFTA2Q6UW10 78 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 BRD3OSQ6XYD6 125 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 DAZ4Q86SG3 579 aaKnown RBP2.37□□□□□ -2.03
HERC6-208ENST00000515365 SIGMAR1Q99720 223 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 SPANXCQ9NY87 97 aa2.37□□□□□ -2.03
HERC6-208ENST00000515365 MUC4Q99102 2169 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 NEBP20929 6669 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 TRAV12-3A0A0B4J271 114 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 ZNF815PA8K554 130 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 TMEM238C9JI98 176 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 CD28P10747 220 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 CD164Q04900 197 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 TEN1Q86WV5 123 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 ST20-AS1Q8NBB2 130 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 ZNRF2Q8NHG8 242 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
HERC6-208ENST00000515365 VPS25Q9BRG1 176 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 NHP2Q9NX24 153 aaKnown RBP2.36□□□□□ -2.03
HERC6-208ENST00000515365 TP53TG1Q9Y2A0 90 aa2.36□□□□□ -2.03
HERC6-208ENST00000515365 DNAH3Q8TD57 4116 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
HERC6-208ENST00000515365 IGHV3OR16-8A0A075B7F1 116 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 TRBV6-4A0A1B0GX49 114 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 IGHV3-33P01772 117 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 COX6CP09669 75 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
HERC6-208ENST00000515365 FXYD7P58549 80 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
HERC6-208ENST00000515365 WFDC2Q14508 124 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 LY6EQ16553 131 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 Q6Q795 121 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 SCGB1D4Q6XE38 83 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 Q6ZQT7 251 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 MUC7Q8TAX7 377 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
HERC6-208ENST00000515365 CARD19Q96LW7 228 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 LINC00527Q9UJ94 153 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 ERG28Q9UKR5 140 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
HERC6-208ENST00000515365 ARHGAP32A7KAX9 2087 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 LOC107984156A0A0G2JMH3 177 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 H3BT86 120 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 NDUFA1O15239 70 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 APOMO95445 188 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 ACYP1P07311 99 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 MGPP08493 103 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 SCGB1C2P0DMR2 95 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 INSL3P51460 131 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 HERVK_113P63121 156 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 ARL17AQ8IVW1 177 aa2.34□□□□□ -2.03
HERC6-208ENST00000515365 MIR7-3HGQ8N6C7 128 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms