RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
SGCA-211ENST00000514934 C20orf202A1L168 122 aa8.8□□□□□ -1
SGCA-211ENST00000514934 PMVKQ15126 192 aa8.8□□□□□ -1
SGCA-211ENST00000514934 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
SGCA-211ENST00000514934 VAMP8Q9BV40 100 aa8.8□□□□□ -1
SGCA-211ENST00000514934 C22orf24Q9Y442 160 aa8.8□□□□□ -1
SGCA-211ENST00000514934 IGLV5-39A0A0G2JS06 123 aa8.79□□□□□ -1
SGCA-211ENST00000514934 CXCL5P42830 114 aa8.79□□□□□ -1
SGCA-211ENST00000514934 KRTDAPP60985 99 aa8.79□□□□□ -1
SGCA-211ENST00000514934 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
SGCA-211ENST00000514934 ATP5LO75964 103 aa8.78□□□□□ -1
SGCA-211ENST00000514934 SPINK8P0C7L1 97 aa8.78□□□□□ -1
SGCA-211ENST00000514934 IGLC3P0DOY3 106 aa8.78□□□□□ -1
SGCA-211ENST00000514934 COX7B2Q8TF08 81 aa8.78□□□□□ -1
SGCA-211ENST00000514934 TP73-AS1Q9UF72 201 aa8.78□□□□□ -1
SGCA-211ENST00000514934 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
SGCA-211ENST00000514934 UBE2BP63146 152 aa8.76□□□□□ -1.01
SGCA-211ENST00000514934 MIEN1Q9BRT3 115 aa8.76□□□□□ -1.01
SGCA-211ENST00000514934 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
SGCA-211ENST00000514934 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
SGCA-211ENST00000514934 ZNF22P17026 224 aaPredicted RBP8.75□□□□□ -1.01
SGCA-211ENST00000514934 M0R143 59 aa8.74□□□□□ -1.01
SGCA-211ENST00000514934 ZNF861PO60384 105 aa8.74□□□□□ -1.01
SGCA-211ENST00000514934 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
SGCA-211ENST00000514934 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
SGCA-211ENST00000514934 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
SGCA-211ENST00000514934 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
SGCA-211ENST00000514934 IFI27L1Q96BM0 104 aa8.73□□□□□ -1.01
SGCA-211ENST00000514934 PAM16Q9Y3D7 125 aa8.73□□□□□ -1.01
SGCA-211ENST00000514934 SPATA45Q537H7 98 aa8.72□□□□□ -1.01
SGCA-211ENST00000514934 LINC00167Q96N53 147 aa8.72□□□□□ -1.01
SGCA-211ENST00000514934 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
SGCA-211ENST00000514934 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.02
SGCA-211ENST00000514934 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
SGCA-211ENST00000514934 Q8NDZ9 215 aa8.71□□□□□ -1.02
SGCA-211ENST00000514934 BCE1O60756 84 aa8.69□□□□□ -1.02
SGCA-211ENST00000514934 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
SGCA-211ENST00000514934 H3BRM9 83 aa8.68□□□□□ -1.02
SGCA-211ENST00000514934 ZNF625Q96I27 306 aaPredicted RBP8.68□□□□□ -1.02
SGCA-211ENST00000514934 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
SGCA-211ENST00000514934 A0A087X002 238 aa8.67□□□□□ -1.02
SGCA-211ENST00000514934 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
SGCA-211ENST00000514934 VPREB1P12018 145 aa8.67□□□□□ -1.02
SGCA-211ENST00000514934 PLNP26678 52 aa8.66□□□□□ -1.02
SGCA-211ENST00000514934 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
SGCA-211ENST00000514934 A0A1B0GV90 55 aa8.65□□□□□ -1.02
SGCA-211ENST00000514934 GAGE10A6NGK3 116 aa8.65□□□□□ -1.02
SGCA-211ENST00000514934 ERG28Q9UKR5 140 aa8.65□□□□□ -1.02
SGCA-211ENST00000514934 PFN2P35080 140 aa8.64□□□□□ -1.03
SGCA-211ENST00000514934 DPM2O94777 84 aa8.63□□□□□ -1.03
SGCA-211ENST00000514934 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
SGCA-211ENST00000514934 COX17Q14061 63 aa8.63□□□□□ -1.03
SGCA-211ENST00000514934 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
SGCA-211ENST00000514934 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
SGCA-211ENST00000514934 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
SGCA-211ENST00000514934 KRTAP13-2Q52LG2 175 aa8.62□□□□□ -1.03
SGCA-211ENST00000514934 COL5A1-AS1Q5SY13 56 aa8.62□□□□□ -1.03
SGCA-211ENST00000514934 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
SGCA-211ENST00000514934 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
SGCA-211ENST00000514934 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
SGCA-211ENST00000514934 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
SGCA-211ENST00000514934 IGKCP01834 107 aa8.6□□□□□ -1.03
SGCA-211ENST00000514934 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
SGCA-211ENST00000514934 MUC2Q02817 5179 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 M0R378 163 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 DLEU1O43261 78 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
SGCA-211ENST00000514934 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
SGCA-211ENST00000514934 H0Y8G0 127 aa8.57□□□□□ -1.04
SGCA-211ENST00000514934 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
SGCA-211ENST00000514934 PRLHP81277 87 aa8.56□□□□□ -1.04
SGCA-211ENST00000514934 COX8AP10176 69 aa8.55□□□□□ -1.04
SGCA-211ENST00000514934 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
SGCA-211ENST00000514934 BATFQ16520 125 aa8.55□□□□□ -1.04
SGCA-211ENST00000514934 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
SGCA-211ENST00000514934 CRYGAP11844 174 aa8.54□□□□□ -1.04
SGCA-211ENST00000514934 HERVK_113P61574 105 aa8.54□□□□□ -1.04
SGCA-211ENST00000514934 UBE2AP49459 152 aa8.53□□□□□ -1.04
SGCA-211ENST00000514934 RPL24P83731 157 aaKnown RBP8.53□□□□□ -1.04
SGCA-211ENST00000514934 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
SGCA-211ENST00000514934 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
SGCA-211ENST00000514934 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
SGCA-211ENST00000514934 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
SGCA-211ENST00000514934 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 E9PLD3 99 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 KRTAP4-16G5E9R7 235 aaPredicted RBP8.51□□□□□ -1.05
SGCA-211ENST00000514934 SPRR1AP35321 89 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 HINT1P49773 126 aaPredicted RBP8.51□□□□□ -1.05
SGCA-211ENST00000514934 LINC00158P58513 81 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
SGCA-211ENST00000514934 TSPAN13O95857 204 aa8.5□□□□□ -1.05
SGCA-211ENST00000514934 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
SGCA-211ENST00000514934 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
SGCA-211ENST00000514934 PRR4Q16378 134 aa8.49□□□□□ -1.05
SGCA-211ENST00000514934 MIR7-3HGQ8N6C7 128 aa8.49□□□□□ -1.05
SGCA-211ENST00000514934 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms