RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 COPS9Q8WXC6 57 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 PRO1854Q9UHT4 67 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
CCL28-204ENST00000514421 TSPAN13O95857 204 aa5.45□□□□□ -1.54
CCL28-204ENST00000514421 FOXI1Q12951 378 aa5.45□□□□□ -1.54
CCL28-204ENST00000514421 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
CCL28-204ENST00000514421 CHCHD10Q8WYQ3 142 aaPredicted RBP5.45□□□□□ -1.54
CCL28-204ENST00000514421 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 LOC107984156A0A0G2JMH3 177 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 CFAP161Q6P656 301 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 ARL17AQ8IVW1 177 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 LINC00308Q8TCZ7 52 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 SPCS1Q9Y6A9 102 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 RYR1P21817 5038 aa5.44□□□□□ -1.54
CCL28-204ENST00000514421 HERC2O95714 4834 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 APOBP04114 4563 aaKnown RBP5.43□□□□□ -1.54
CCL28-204ENST00000514421 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
CCL28-204ENST00000514421 COX7A2LO14548 114 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 CDK2AP2O75956 126 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 APOMO95445 188 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 CXCL5P42830 114 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 XCL1P47992 114 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
CCL28-204ENST00000514421 NAA38Q9BRA0 125 aaKnown RBP5.43□□□□□ -1.54
CCL28-204ENST00000514421 TRBV20-1A0A075B6N2 111 aa5.42□□□□□ -1.54
CCL28-204ENST00000514421 PRSS2P07478 247 aa5.42□□□□□ -1.54
CCL28-204ENST00000514421 COX17Q14061 63 aa5.42□□□□□ -1.54
CCL28-204ENST00000514421 LYRM7Q5U5X0 104 aa5.42□□□□□ -1.54
CCL28-204ENST00000514421 SOSTDC1Q6X4U4 206 aa5.42□□□□□ -1.54
CCL28-204ENST00000514421 HSPG2P98160 4391 aa5.41□□□□□ -1.54
CCL28-204ENST00000514421 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
CCL28-204ENST00000514421 C6orf226Q5I0X4 101 aa5.41□□□□□ -1.54
CCL28-204ENST00000514421 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
CCL28-204ENST00000514421 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
CCL28-204ENST00000514421 F8W1H4 67 aa5.4□□□□□ -1.54
CCL28-204ENST00000514421 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
CCL28-204ENST00000514421 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
CCL28-204ENST00000514421 PRO0461Q9UI25 63 aa5.4□□□□□ -1.54
CCL28-204ENST00000514421 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
CCL28-204ENST00000514421 XGP55808 180 aa5.39□□□□□ -1.55
CCL28-204ENST00000514421 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
CCL28-204ENST00000514421 DAND5Q8N907 189 aa5.39□□□□□ -1.55
CCL28-204ENST00000514421 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
CCL28-204ENST00000514421 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
CCL28-204ENST00000514421 F8WDY8 70 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 M0QXV9 152 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 SLPIP03973 132 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 MALP21145 153 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
CCL28-204ENST00000514421 FAT1Q14517 4588 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 H3BMG7 143 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 TRIAP1O43715 76 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 CKS1BP61024 79 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 LINC01620Q4KN68 170 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
CCL28-204ENST00000514421 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 NDUFC2O95298 119 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 TCL1BO95988 128 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 LINC00158P58513 81 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 SDIM1Q6ZPB5 146 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
CCL28-204ENST00000514421 RPL13AP40429 203 aaKnown RBP5.35□□□□□ -1.55
CCL28-204ENST00000514421 NPC2P61916 151 aa5.35□□□□□ -1.55
CCL28-204ENST00000514421 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
CCL28-204ENST00000514421 Q6ZSA8 131 aa5.35□□□□□ -1.55
CCL28-204ENST00000514421 C2orf48Q96LS8 159 aa5.35□□□□□ -1.55
CCL28-204ENST00000514421 A0A0U1RRA0 63 aa5.34□□□□□ -1.55
CCL28-204ENST00000514421 COX6CP09669 75 aa5.34□□□□□ -1.55
CCL28-204ENST00000514421 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
CCL28-204ENST00000514421 Q8N1X5 172 aa5.34□□□□□ -1.55
CCL28-204ENST00000514421 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.55
CCL28-204ENST00000514421 DPH3Q96FX2 82 aa5.34□□□□□ -1.55
CCL28-204ENST00000514421 LST1O00453 97 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 PFN2P35080 140 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 PSMB2P49721 201 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 SYCNQ0VAF6 134 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 ATXN8Q156A1 80 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 LINC00526Q96FQ7 95 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
CCL28-204ENST00000514421 SMR3BP02814 79 aaPredicted RBP5.32□□□□□ -1.56
CCL28-204ENST00000514421 SCGB1C2P0DMR2 95 aa5.32□□□□□ -1.56
CCL28-204ENST00000514421 HAMPP81172 84 aa5.32□□□□□ -1.56
CCL28-204ENST00000514421 Q1RN00 199 aa5.32□□□□□ -1.56
CCL28-204ENST00000514421 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
CCL28-204ENST00000514421 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
CCL28-204ENST00000514421 EPM2AB3EWF7 344 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms