RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MRPL55Q7Z7F7 128 aaKnown RBP1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 ORAOV1Q8WV07 137 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 PPP1R1CQ8WVI7 109 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 GNB1LQ9BYB4 327 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 SMIM3Q9BZL3 60 aa1.97□□□□□ -2.09
PDLIM5-218ENST00000513341 TRAV13-1A0A0B4J241 112 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 C7orf77A4D0Y5 90 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 F8W036 122 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 TSTD3H0UI37 97 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 SIX6O95475 246 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 AKR1C3P42330 323 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 POLR2KP53803 58 aaKnown RBP1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 H2BFSP57053 126 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 KIAA0087Q14695 138 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 TAL2Q16559 108 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 LYZL1Q6UWQ5 148 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 LINC00167Q96N53 147 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 TIMM21Q9BVV7 248 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 CNFNQ9BYD5 112 aa1.96□□□□□ -2.1
PDLIM5-218ENST00000513341 K7EN84 100 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 TCAPO15273 167 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 ARPC5O15511 151 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 SLC25A20O43772 301 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 PFDN1O60925 122 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 S100PP25815 95 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 UBE2AP49459 152 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 PLEKHB2Q96CS7 222 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 RPL39LQ96EH5 51 aaKnown RBP1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 SMIM12Q96EX1 92 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 ST20Q9HBF5 79 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 BIN3Q9NQY0 253 aa1.95□□□□□ -2.1
PDLIM5-218ENST00000513341 LINC00587B1AMM8 73 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 PPP1R17O96001 155 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 FOXA3P55318 350 aaPredicted RBP1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 ZNF726P1Q15940 193 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 CEND1Q8N111 149 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 C3orf22Q8N5N4 141 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 SPANXA1Q9NS26 97 aa1.94□□□□□ -2.1
PDLIM5-218ENST00000513341 TGIF2-C20orf24A0A0A6YYL0 155 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 BORCS7-ASMTA0A0B4J1R7 106 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 GIPP09681 153 aaPredicted RBP1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 FCER1GP30273 86 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 CKS1BP61024 79 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 MRPS36P82909 103 aaKnown RBP1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 SSBP3-AS1Q7Z2R9 100 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 LINC01551Q86U37 167 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 C2orf88Q9BSF0 95 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 RNASE7Q9H1E1 156 aaKnown RBP1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 XAGE1AQ9HD64 81 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 TMEM242Q9NWH2 141 aa1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
PDLIM5-218ENST00000513341 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 TINCRA0A1B0GVN0 87 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 MAP1LC3B2A6NCE7 125 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 SMIM6P0DI80 62 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 CD164Q04900 197 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 Q5BKY6 102 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 AKR1C8PQ5T2L2 129 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 CBLN2Q8IUK8 224 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 MBD3L1Q8WWY6 194 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 C12orf57Q99622 126 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 MAP1LC3BQ9GZQ8 125 aa1.92□□□□□ -2.1
PDLIM5-218ENST00000513341 NEBP20929 6669 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 A0A1B0GV90 55 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 F8VRH5 84 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 HBBP68871 147 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 CCL20P78556 96 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 RNASE13Q5GAN3 156 aaKnown RBP1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 Q6ZN92 141 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 Q6ZUT4 128 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 FAM19A1Q7Z5A9 133 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 Q8IZM0 81 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 NKAPP1Q8N9T2 125 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 FAM104AQ969W3 186 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 SPRR4Q96PI1 79 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 TMEM126AQ9H061 195 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 TMEM191AQ9H0A3 160 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 MAP1LC3AQ9H492 121 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
PDLIM5-218ENST00000513341 HMSDA8MTL9 139 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 UMAD1C9J7I0 102 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 RAB5AP20339 215 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 CXCL5P42830 114 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 GNG4P50150 75 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 PRLHP81277 87 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 KCNRGQ8N5I3 272 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 OR13C6PQ8NH95 151 aa1.9□□□□□ -2.11
PDLIM5-218ENST00000513341 HIST1H4GQ99525 98 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms