RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 ACANP16112 2415 aa-0.48□□□□□ -2.49
SMN1-208ENST00000513228 DNAH3Q8TD57 4116 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 DNAH6Q9C0G6 4158 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 KRTAP6-2Q3LI66 62 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 H1FX-AS1Q4G0G2 97 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 DEFB107AQ8IZN7 70 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 CACFD1Q9UGQ2 172 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 FLNBO75369 2602 aaKnown RBP-0.49□□□□□ -2.49
SMN1-208ENST00000513228 NIPBLQ6KC79 2804 aaeCLIP-0.49□□□□□ -2.49
SMN1-208ENST00000513228 NCOA3Q9Y6Q9 1424 aa-0.49□□□□□ -2.49
SMN1-208ENST00000513228 PRDM15P57071 1507 aaPredicted RBP-0.49□□□□□ -2.49
SMN1-208ENST00000513228 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 TRBV25-1A0A075B6N4 114 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 C20orf202A1L168 122 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 H0Y9P7 68 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 H7BZZ5 65 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 WDR87Q6ZQQ6 2873 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 MLH3Q9UHC1 1453 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 SHPRHQ149N8 1683 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 PKHD1L1Q86WI1 4243 aa-0.5□□□□□ -2.49
SMN1-208ENST00000513228 PRRC2CQ9Y520 2896 aaKnown RBP-0.51□□□□□ -2.49
SMN1-208ENST00000513228 H3BQF6 201 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 GNGT2O14610 69 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 DSPP15924 2871 aaKnown RBP-0.51□□□□□ -2.49
SMN1-208ENST00000513228 PSMG4Q5JS54 123 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 CCDC141Q6ZP82 1450 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 VAMP8Q9BV40 100 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 KIAA1551Q9HCM1 1747 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 TNRC18O15417 2968 aaPredicted RBP-0.51□□□□□ -2.49
SMN1-208ENST00000513228 EPG5Q9HCE0 2579 aa-0.51□□□□□ -2.49
SMN1-208ENST00000513228 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.52□□□□□ -2.49
SMN1-208ENST00000513228 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 CELSR3Q9NYQ7 3312 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 MT-ATP8P03928 68 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 SPRR2AP35326 72 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 PMCHL1Q16048 86 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 ANKRD36A6QL64 1941 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 LRRC37AA6NMS7 1700 aa-0.52□□□□□ -2.49
SMN1-208ENST00000513228 CNOT1A5YKK6 2376 aaKnown RBP-0.53□□□□□ -2.49
SMN1-208ENST00000513228 CUX1P39880 1505 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 NRXN1Q9ULB1 1477 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 ANKRD36BQ8N2N9 1353 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 USP9XQ93008 2570 aaPredicted RBP-0.53□□□□□ -2.49
SMN1-208ENST00000513228 SPTBN4Q9H254 2564 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 I3L3M4 83 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 NDUFC1O43677 76 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 DEFB135Q30KP9 77 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 LELP1Q5T871 98 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 C14orf144Q96I85 54 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 TRGV9Q99603 122 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 PMCHL2Q9BQD1 86 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 PCNX1Q96RV3 2341 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 MON2Q7Z3U7 1717 aa-0.53□□□□□ -2.49
SMN1-208ENST00000513228 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 FASNP49327 2511 aaKnown RBP-0.54□□□□□ -2.5
SMN1-208ENST00000513228 MYO18BQ8IUG5 2567 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 GNGT1P63211 74 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 MRPL34Q9BQ48 92 aaKnown RBP-0.54□□□□□ -2.5
SMN1-208ENST00000513228 C5P01031 1676 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 LAMA3Q16787 3333 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 RAPGEF2Q9Y4G8 1499 aa-0.54□□□□□ -2.5
SMN1-208ENST00000513228 PLECQ15149 4684 aaKnown RBP-0.55□□□□□ -2.5
SMN1-208ENST00000513228 TMEM218A2RU14 115 aa-0.55□□□□□ -2.5
SMN1-208ENST00000513228 UQCRHP07919 91 aa-0.55□□□□□ -2.5
SMN1-208ENST00000513228 ARMS2P0C7Q2 107 aa-0.55□□□□□ -2.5
SMN1-208ENST00000513228 SAMD9Q5K651 1589 aa-0.55□□□□□ -2.5
SMN1-208ENST00000513228 CUBNO60494 3623 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 ANK3Q12955 4377 aaKnown RBP-0.56□□□□□ -2.5
SMN1-208ENST00000513228 TRAV30A0A087WSZ9 112 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 MPC2O95563 127 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 S100A10P60903 97 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 AKAP9Q99996 3911 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 VPS13DQ5THJ4 4388 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 COL6A5A8TX70 2615 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 VPS13BQ7Z7G8 4022 aa-0.56□□□□□ -2.5
SMN1-208ENST00000513228 CMYA5Q8N3K9 4069 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 PEG3Q9GZU2 1588 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 ABCC2Q92887 1545 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 ATP6V1G2-DDX39BF2Z307 99 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 ATOX1O00244 68 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 SPRR2EP22531 72 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 S100PP25815 95 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 C9orf62Q8N4C0 152 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 SERP2Q8N6R1 65 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 DNAH7Q8WXX0 4024 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 TACC2O95359 2948 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 AKAP13Q12802 2813 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 TEX15Q9BXT5 2789 aa-0.57□□□□□ -2.5
SMN1-208ENST00000513228 LAMA1P25391 3075 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 ANKRD11Q6UB99 2663 aaPredicted RBP-0.58□□□□□ -2.5
SMN1-208ENST00000513228 FYCO1Q9BQS8 1478 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 TRBV7-7A0A0K0K1E9 115 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 DEFB112Q30KQ8 113 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 AP4S1Q9Y587 144 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 CNTLNQ9NXG0 1405 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 COL14A1Q05707 1796 aaKnown RBP-0.58□□□□□ -2.5
SMN1-208ENST00000513228 ADAMTS12P58397 1594 aa-0.58□□□□□ -2.5
SMN1-208ENST00000513228 NBEAL2Q6ZNJ1 2754 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms