RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 FREM3P0C091 2139 aa1.9□□□□□ -2.1
PVT1-202ENST00000512617 MED12LQ86YW9 2145 aa1.9□□□□□ -2.1
PVT1-202ENST00000512617 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 A0A087WWC5 75 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 A0A0G2JQZ4 141 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 C7orf77A4D0Y5 90 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 UMAD1C9J7I0 102 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 RTL8CO15255 209 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 ZNF56Q15929 161 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 DEFB107AQ8IZN7 70 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 DYNLRB1Q9NP97 96 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 HRNRQ86YZ3 2850 aaPredicted RBP1.9□□□□□ -2.11
PVT1-202ENST00000512617 MED13LQ71F56 2210 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 POLQO75417 2590 aa1.9□□□□□ -2.11
PVT1-202ENST00000512617 ANKHD1Q8IWZ3 2542 aaKnown RBP1.89□□□□□ -2.11
PVT1-202ENST00000512617 CENPEQ02224 2701 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 A0A096LNT2 108 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 ZNF815PA8K554 130 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 HMGN4O00479 90 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 ELOF1P60002 83 aaKnown RBP1.89□□□□□ -2.11
PVT1-202ENST00000512617 SSBP1Q04837 148 aaKnown RBP1.89□□□□□ -2.11
PVT1-202ENST00000512617 TVP23CQ96ET8 276 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 SMR3AQ99954 134 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 TP53TG3Q9ULZ0 132 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 VPS13CQ709C8 3753 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 CCDC168Q8NDH2 2452 aa1.89□□□□□ -2.11
PVT1-202ENST00000512617 FN1P02751 2386 aaKnown RBP1.88□□□□□ -2.11
PVT1-202ENST00000512617 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 TRBV6-7A0A0A0MS04 114 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 HIGD1CA8MV81 97 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 PPYP01298 95 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 IGHV3-30P01768 117 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 IGHV3-30-5P0DP03 117 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 PSMG4Q5JS54 123 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 KRTAP11-1Q8IUC1 163 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 C20orf197Q8N268 126 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 CCL19Q99731 98 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 CDC42SE2Q9NRR3 84 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 NDUFA4L2Q9NRX3 87 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 LENEPQ9Y5L5 61 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 V9GYH0 126 aa1.88□□□□□ -2.11
PVT1-202ENST00000512617 TACC2O95359 2948 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 ABCA4P78363 2273 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 IGKV2-28A0A075B6P5 120 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 TRBV6-4A0A1B0GX49 114 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 F8WEM9 126 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 PPP1R17O96001 155 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 IGKV2D-28P01615 120 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 S100A3P33764 101 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 PRR14LQ5THK1 2151 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 TMEM14BQ9NUH8 114 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 PRR34Q9NV39 138 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 ANAPC11Q9NYG5 84 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 NF1P21359 2839 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 NAV3Q8IVL0 2385 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 MPDZO75970 2070 aa1.87□□□□□ -2.11
PVT1-202ENST00000512617 AKAP6Q13023 2319 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 CUBNO60494 3623 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 FREM1Q5H8C1 2179 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 MUC4Q99102 2169 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 CR1P17927 2039 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 ACANP16112 2415 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 MYMXA0A1B0GTQ4 84 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 A0A1B0GWA3 101 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 A8MU10 97 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 IQCF6A8MYZ5 107 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 JMJD7-PLA2G4BH0Y9G9 81 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 FXYD1O00168 92 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
PVT1-202ENST00000512617 DNAL4O96015 105 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 SPAG11BQ08648 103 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 SPAG11AQ6PDA7 123 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 ZNF563Q8TA94 476 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 WFDC10AQ9H1F0 79 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 KLK9Q9UKQ9 250 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 MTORP42345 2549 aa1.86□□□□□ -2.11
PVT1-202ENST00000512617 SETD2Q9BYW2 2564 aaPredicted RBP1.86□□□□□ -2.11
PVT1-202ENST00000512617 LOC101927531A0A1B0GV80 90 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 CLPSL1A2RUU4 121 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 IGLV3-1P01715 115 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 SFTA3P0C7M3 94 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 SAA2P0DJI9 122 aaPredicted RBP1.85□□□□□ -2.11
PVT1-202ENST00000512617 PDE6GP18545 87 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 MT3P25713 68 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 FAM74A4Q5TZK3 123 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 C6orf201Q7Z4U5 140 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 PSENENQ9NZ42 101 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 FLNAP21333 2647 aaKnown RBP1.85□□□□□ -2.11
PVT1-202ENST00000512617 ABCA2Q9BZC7 2435 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 CADP27708 2225 aa1.85□□□□□ -2.11
PVT1-202ENST00000512617 USF3Q68DE3 2245 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms