RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 APLNQ9ULZ1 77 aa0.04□□□□□ -2.4
SMN2-211ENST00000511873 RYR2Q92736 4967 aa0.03□□□□□ -2.4
SMN2-211ENST00000511873 SPTA1P02549 2419 aa0.03□□□□□ -2.4
SMN2-211ENST00000511873 HMGN3Q15651 99 aa0.03□□□□□ -2.4
SMN2-211ENST00000511873 RNF213Q63HN8 5207 aa0.03□□□□□ -2.41
SMN2-211ENST00000511873 EDC4Q6P2E9 1401 aaKnown RBP0.03□□□□□ -2.41
SMN2-211ENST00000511873 C5P01031 1676 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 SPINK4O60575 86 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 GYPAP02724 150 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 IGLC2P0DOY2 106 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 IGLC3P0DOY3 106 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 Q9H521 79 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 MYH4Q9Y623 1939 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 CREBBPQ92793 2442 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 DOPEY1Q5JWR5 2465 aa0.02□□□□□ -2.41
SMN2-211ENST00000511873 EP300Q09472 2414 aaPredicted RBP0.01□□□□□ -2.41
SMN2-211ENST00000511873 I3L3M4 83 aa0□□□□□ -2.41
SMN2-211ENST00000511873 KIAA1109Q2LD37 5005 aa0□□□□□ -2.41
SMN2-211ENST00000511873 ALKAL2Q6UX46 152 aa0□□□□□ -2.41
SMN2-211ENST00000511873 CHD8Q9HCK8 2581 aa0□□□□□ -2.41
SMN2-211ENST00000511873 HECTD1Q9ULT8 2610 aa-0□□□□□ -2.41
SMN2-211ENST00000511873 CUX1P39880 1505 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 ATP10BO94823 1461 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 NKTRP30414 1462 aaKnown RBP-0.01□□□□□ -2.41
SMN2-211ENST00000511873 CCDC141Q6ZP82 1450 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 SETD2Q9BYW2 2564 aaPredicted RBP-0.01□□□□□ -2.41
SMN2-211ENST00000511873 LOC730098B7Z3J9 87 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 RIF1Q5UIP0 2472 aaKnown RBP-0.01□□□□□ -2.41
SMN2-211ENST00000511873 PKD1L2Q7Z442 2459 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 TNXBP22105 4242 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 DCHS2Q6V1P9 2916 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
SMN2-211ENST00000511873 CRYBG1Q9Y4K1 1723 aa-0.01□□□□□ -2.41
SMN2-211ENST00000511873 SAMD9Q5K651 1589 aa-0.02□□□□□ -2.41
SMN2-211ENST00000511873 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.02□□□□□ -2.41
SMN2-211ENST00000511873 EPRSP07814 1512 aaKnown RBP-0.02□□□□□ -2.41
SMN2-211ENST00000511873 FANCAO15360 1455 aa-0.02□□□□□ -2.41
SMN2-211ENST00000511873 SPRR2DP22532 72 aa-0.02□□□□□ -2.41
SMN2-211ENST00000511873 DEFB112Q30KQ8 113 aa-0.02□□□□□ -2.41
SMN2-211ENST00000511873 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
SMN2-211ENST00000511873 FLNAP21333 2647 aaKnown RBP-0.02□□□□□ -2.41
SMN2-211ENST00000511873 RYR1P21817 5038 aa-0.03□□□□□ -2.41
SMN2-211ENST00000511873 LRRC37AA6NMS7 1700 aa-0.03□□□□□ -2.41
SMN2-211ENST00000511873 HMGN2P05204 90 aaKnown RBP-0.03□□□□□ -2.41
SMN2-211ENST00000511873 PEA15Q15121 130 aa-0.03□□□□□ -2.41
SMN2-211ENST00000511873 H1FX-AS1Q4G0G2 97 aa-0.03□□□□□ -2.41
SMN2-211ENST00000511873 V9GYS6 101 aa-0.03□□□□□ -2.41
SMN2-211ENST00000511873 SETXQ7Z333 2677 aaKnown RBP-0.03□□□□□ -2.41
SMN2-211ENST00000511873 TROQ12816 1431 aaPredicted RBP-0.04□□□□□ -2.42
SMN2-211ENST00000511873 SMIM11AP58511 58 aa-0.04□□□□□ -2.42
SMN2-211ENST00000511873 UBE2D4Q9Y2X8 147 aa-0.04□□□□□ -2.42
SMN2-211ENST00000511873 RGPD4Q7Z3J3 1758 aa-0.04□□□□□ -2.42
SMN2-211ENST00000511873 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 ACANP16112 2415 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 KIF20BQ96Q89 1820 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 SPTY2D1-AS1A0A0U1RR47 76 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 PYY3Q5JQD4 70 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 BPTFQ12830 3046 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 WNK1Q9H4A3 2382 aa-0.05□□□□□ -2.42
SMN2-211ENST00000511873 FASNP49327 2511 aaKnown RBP-0.06□□□□□ -2.42
SMN2-211ENST00000511873 NEXMIFQ5QGS0 1516 aa-0.06□□□□□ -2.42
SMN2-211ENST00000511873 UBR1Q8IWV7 1749 aa-0.06□□□□□ -2.42
SMN2-211ENST00000511873 KIAA1551Q9HCM1 1747 aa-0.06□□□□□ -2.42
SMN2-211ENST00000511873 MRPL34Q9BQ48 92 aaKnown RBP-0.06□□□□□ -2.42
SMN2-211ENST00000511873 KMT2AQ03164 3969 aa-0.06□□□□□ -2.42
SMN2-211ENST00000511873 RGPD3A6NKT7 1758 aaPredicted RBP-0.06□□□□□ -2.42
SMN2-211ENST00000511873 TTC37Q6PGP7 1564 aa-0.06□□□□□ -2.42
SMN2-211ENST00000511873 HMCN2Q8NDA2 5059 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 IQSEC2Q5JU85 1478 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 IQCF6A8MYZ5 107 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 K7EP34 96 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 NMSQ5H8A3 153 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 S100A16Q96FQ6 103 aaKnown RBP-0.07□□□□□ -2.42
SMN2-211ENST00000511873 MYO3AQ8NEV4 1616 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 CEP162Q5TB80 1403 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 COL14A1Q05707 1796 aaKnown RBP-0.07□□□□□ -2.42
SMN2-211ENST00000511873 COL6A5A8TX70 2615 aa-0.07□□□□□ -2.42
SMN2-211ENST00000511873 LELP1Q5T871 98 aa-0.08□□□□□ -2.42
SMN2-211ENST00000511873 BSNQ9UPA5 3926 aa-0.08□□□□□ -2.42
SMN2-211ENST00000511873 PKD1L3Q7Z443 1732 aa-0.08□□□□□ -2.42
SMN2-211ENST00000511873 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.08□□□□□ -2.42
SMN2-211ENST00000511873 FAT2Q9NYQ8 4349 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 RYR3Q15413 4870 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 PLGLAQ15195 96 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 HEPN1Q6WQI6 88 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 COL12A1Q99715 3063 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 HSPG2P98160 4391 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 RGPD2P0DJD1 1756 aa-0.09□□□□□ -2.42
SMN2-211ENST00000511873 CYB5AP00167 134 aa-0.1□□□□□ -2.43
SMN2-211ENST00000511873 HYDINQ4G0P3 5121 aa-0.1□□□□□ -2.43
SMN2-211ENST00000511873 ABCA13Q86UQ4 5058 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 UBR3Q6ZT12 1888 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 ANKRD11Q6UB99 2663 aaPredicted RBP-0.11□□□□□ -2.43
SMN2-211ENST00000511873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.11□□□□□ -2.43
SMN2-211ENST00000511873 A0A1B0GUT8 65 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 PVALEFA0A1B0GWK0 134 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 C9orf62Q8N4C0 152 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 MYCBP2O75592 4640 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 TENM2Q9NT68 2774 aa-0.11□□□□□ -2.43
SMN2-211ENST00000511873 PLIN4Q96Q06 1357 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms