RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 C22orf24Q9Y442 160 aa2.03□□□□□ -2.08
NUP54-209ENST00000510569 MYO18BQ8IUG5 2567 aa2.03□□□□□ -2.09
NUP54-209ENST00000510569 CNOT1A5YKK6 2376 aaKnown RBP2.02□□□□□ -2.09
NUP54-209ENST00000510569 TRBV7-3A0A075B6L6 115 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 TRAV12-1A0A0B4J245 112 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 CTXND1A0A1B0GTU2 59 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 IQCF6A8MYZ5 107 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 PSCAO43653 123 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 FXYD4P59646 89 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 DEFB113Q30KQ7 82 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 KRTAP26-1Q6PEX3 210 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 ZNF833PQ6ZTB9 187 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 Q8TAT8 98 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 TXNDC17Q9BRA2 123 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 MANBALQ9NQG1 85 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 S4R3C0 116 aa2.02□□□□□ -2.09
NUP54-209ENST00000510569 TPRP12270 2363 aaKnown RBP2.02□□□□□ -2.09
NUP54-209ENST00000510569 ABCA1O95477 2261 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 FLNCQ14315 2725 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 MGAQ8IWI9 3026 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 TRAV23DV6A0A075B6W5 121 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 A0A0J9YX75 114 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 PRH1P02810 166 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 COX6CP09669 75 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 P0C880 135 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 SMIM13P0DJ93 91 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 DEFB119Q8N690 84 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 Q8N6K4 173 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 LIMD2Q9BT23 127 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 HEATR1Q9H583 2144 aaKnown RBP2.01□□□□□ -2.09
NUP54-209ENST00000510569 DCHS2Q6V1P9 2916 aa2.01□□□□□ -2.09
NUP54-209ENST00000510569 URB1O60287 2271 aaKnown RBP2.01□□□□□ -2.09
NUP54-209ENST00000510569 MAST4O15021 2626 aa2□□□□□ -2.09
NUP54-209ENST00000510569 TRAV12-3A0A0B4J271 114 aa2□□□□□ -2.09
NUP54-209ENST00000510569 TRAV22A0A0B4J277 110 aa2□□□□□ -2.09
NUP54-209ENST00000510569 A0A1W2PNM2 257 aa2□□□□□ -2.09
NUP54-209ENST00000510569 ERHP84090 104 aaKnown RBP2□□□□□ -2.09
NUP54-209ENST00000510569 TFF3Q07654 80 aa2□□□□□ -2.09
NUP54-209ENST00000510569 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
NUP54-209ENST00000510569 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
NUP54-209ENST00000510569 TTTY12Q9BZ98 90 aa2□□□□□ -2.09
NUP54-209ENST00000510569 DYNLRB1Q9NP97 96 aa2□□□□□ -2.09
NUP54-209ENST00000510569 TMEM14BQ9NUH8 114 aa2□□□□□ -2.09
NUP54-209ENST00000510569 PSENENQ9NZ42 101 aa2□□□□□ -2.09
NUP54-209ENST00000510569 GNG13Q9P2W3 67 aa2□□□□□ -2.09
NUP54-209ENST00000510569 TACC2O95359 2948 aa2□□□□□ -2.09
NUP54-209ENST00000510569 PIEZO2Q9H5I5 2752 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 TRBV25-1A0A075B6N4 114 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 TMSB15BA0A087X1C1 80 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 TRBV10-1A0A0K0K1A3 114 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 TMEM30CPA0ZSE6 113 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 CEBPZOSA8MTT3 80 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 MRPL33O75394 65 aaKnown RBP1.99□□□□□ -2.09
NUP54-209ENST00000510569 PRB1P04280 392 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
NUP54-209ENST00000510569 IAPPP10997 89 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 UBE2D1P51668 147 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 EDDM3BP56851 147 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 DEFB121Q5J5C9 76 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 PSMG4Q5JS54 123 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 Q5VV11 94 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 FAM223AQ8IWN6 122 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 V9GYV3 84 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 ICE1Q9Y2F5 2266 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 FASNP49327 2511 aaKnown RBP1.99□□□□□ -2.09
NUP54-209ENST00000510569 ZNF462Q96JM2 2506 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 ROS1P08922 2347 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 PTPRQQ9UMZ3 2332 aa1.99□□□□□ -2.09
NUP54-209ENST00000510569 TLN1Q9Y490 2541 aaKnown RBP1.98□□□□□ -2.09
NUP54-209ENST00000510569 HRNRQ86YZ3 2850 aaPredicted RBP1.98□□□□□ -2.09
NUP54-209ENST00000510569 TEX15Q9BXT5 2789 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 SMIM27A0A1W2PRY6 76 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 IGHV3-33P01772 117 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 GCHFRP30047 84 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 ZNF137PP52743 207 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 PDE6HQ13956 83 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 IFI27L1Q96BM0 104 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 Q9BRP9 147 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 BPESC1Q9GZL8 116 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 APC2O95996 2303 aa1.98□□□□□ -2.09
NUP54-209ENST00000510569 RP1L1Q8IWN7 2480 aaPredicted RBP1.98□□□□□ -2.09
NUP54-209ENST00000510569 ANKHD1Q8IWZ3 2542 aaKnown RBP1.97□□□□□ -2.09
NUP54-209ENST00000510569 PKDREJQ9NTG1 2253 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 HECTD1Q9ULT8 2610 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 TRBV6-1A0A0K0K1D8 114 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 C2orf70A6NJV1 201 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 J3QKU1 62 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 ARL14EPLP0DKL9 152 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 COX8AP10176 69 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 ZNF56Q15929 161 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 DMAC1Q96GE9 116 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 CDC42SE2Q9NRR3 84 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 ACACAQ13085 2346 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 PCNX1Q96RV3 2341 aa1.97□□□□□ -2.09
NUP54-209ENST00000510569 PTPN13Q12923 2485 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms